Pairwise Alignments

Query, 468 a.a., selenocysteine-specific translation elongation factor from Methanococcus maripaludis S2

Subject, 394 a.a., translation elongation factor Tu (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  140 bits (352), Expect = 1e-37
 Identities = 84/283 (29%), Positives = 152/283 (53%), Gaps = 20/283 (7%)

Query: 5   NINLGIFGHIDHGKTTLSKVLTEIAST---------SAHDKLPESQKRGITIDIGFSAFK 55
           ++N+G  GH+DHGKTTL+  ++ + +          S  D  PE ++RGITI+     + 
Sbjct: 12  HVNVGTIGHVDHGKTTLTAAISHVLAKTYGGEAKDFSQIDNAPEERERGITINTSHIEYD 71

Query: 56  LENYRITLVDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIP-I 114
             +     VD PGHAD ++ +++ A  +D A++VV + +GP  QT EH+L+     +P I
Sbjct: 72  TPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVPFI 131

Query: 115 IVVITKSDNAGTEE-IKRTEMIMKSIL-------QSTQNLKNSSIIPISAKTGFGVEELK 166
           IV + K D     E ++  EM ++ +L            ++ S++  +  +  +  + L+
Sbjct: 132 IVFMNKCDMVDDAELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALEGEPEWEAKILE 191

Query: 167 NLIINTLNNAEIIRNTESYFKMPLDHAFPIKGAGTVVTGTINKGIVKVGDELKVLPINMS 226
                     E  R+ +  F MP++  F I G GTVVTG + +GIV+VGDE++++ I  +
Sbjct: 192 LAAALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVRVGDEVEIVGIRTT 251

Query: 227 TKV--RSIQCFKESVMEAKAGDRVGMAIQGVESKQIYRGCILT 267
           TK     ++ F++ + E +AG+  G+ ++G +   + RG +L+
Sbjct: 252 TKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVLS 294