Pairwise Alignments

Query, 468 a.a., selenocysteine-specific translation elongation factor from Methanococcus maripaludis S2

Subject, 642 a.a., selenocysteine-specific translation elongation factor (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  152 bits (383), Expect = 4e-41
 Identities = 95/266 (35%), Positives = 149/266 (56%), Gaps = 8/266 (3%)

Query: 8   LGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENY-RITLVDA 66
           +G  GHIDHGKT+L + LT I      D+L E ++RGITI++GF+   L    R+ +VD 
Sbjct: 5   MGTAGHIDHGKTSLVRALTGIDC----DRLDEEKRRGITIELGFAFCDLPGGGRLGVVDV 60

Query: 67  PGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIPI-IVVITKSDNAG 125
           PGH   +R +V+ A  +D  ++V+ A EG   QT EH+ I     I   +V +TK D   
Sbjct: 61  PGHEKFVRNMVAGASGVDFVMLVIAADEGVMPQTREHLEICSLLGIRHGLVALTKVDMVD 120

Query: 126 TEEIKRTEMIMKSILQSTQNLKNSSIIPISAKTGFGVEELKNLIINTLNNAEIIRNTESY 185
            + ++  +  +   L  T  L+ + I P+SA TG G++ L+  +          R T+  
Sbjct: 121 ADWLELAQDDVAGFLAGTF-LEGAPIFPVSAVTGQGLDTLREHLATLERELRPERRTD-L 178

Query: 186 FKMPLDHAFPIKGAGTVVTGTINKGIVKVGDELKVLPINMSTKVRSIQCFKESVMEAKAG 245
           F++P+D  F ++G GTVVTGT+  G +KVGD++ + P   ++KVR +Q     V +A AG
Sbjct: 179 FRLPVDRVFTMRGHGTVVTGTMISGSLKVGDDVVLYPEGRTSKVRGLQSHGGPVDKALAG 238

Query: 246 DRVGMAIQGVESKQIYRGCILTSKDT 271
            R  + +QGV+  ++ RG +L    T
Sbjct: 239 RRTAVNLQGVDVAEVQRGEVLALPGT 264