Pairwise Alignments

Query, 384 a.a., 50S ribosome-binding GTPase from Methanococcus maripaludis S2

Subject, 313 a.a., ribosomal biogenesis GTPase (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (250), Expect = 4e-26
 Identities = 72/258 (27%), Positives = 141/258 (54%), Gaps = 13/258 (5%)

Query: 21  RRMVHKIIYECNIVLLVVDARDPETTRNRALEEYTIEKNKKLIYVINKSDLVPKKILEKW 80
           R+ + +++ + ++V+ V+DAR P ++ N  +   ++  N+  I ++NKSDL   +I ++W
Sbjct: 14  RKEIAEVMPQVDLVIEVLDARIPYSSENPMVT--SLRGNRPCIKLLNKSDLADPEITQRW 71

Query: 81  KNKFKSENPDSSVVFVSAKEKLGTKMLRDEIKTYLNSNNIKYG-QVGIVGYPNVGKSSII 139
            +  + E    ++   + +     K+     K   + + I+   +  I+G PNVGKS+II
Sbjct: 72  IDYLEQEQGVKAMAITTLQAAQVRKVPELCRKLVPSRDKIEKDIRTMIMGIPNVGKSTII 131

Query: 140 NALTGKKSARSGLTAGLTVGEQWVKLTKDIKLLDSPGIIEPKDEDE-----LVISGALR- 193
           N L G+  A++G    +T  +Q + L   I L D+PGI+ PK ++E     L ++GA++ 
Sbjct: 132 NTLAGRVIAKTGNEPAVTKTQQRINLKNGIVLSDTPGILWPKVDNEASGYRLAVTGAIKD 191

Query: 194 -YEKADDIISPALKILNRIHTFDNTILKEYYGFEIGEEINIELLEKIGTKLNFLTKDGKI 252
              + +D+   A +    +  + + +L+ Y   E+  + +I LLE IG K   L   G+I
Sbjct: 192 TAMEYEDVAMFAAEYF--LKAYPDAMLERYKLKELPND-DIGLLEAIGRKRGALRPGGRI 248

Query: 253 DIDRTSKSIIREFQNGKL 270
           D+ + S+ ++ EF++GK+
Sbjct: 249 DLHKASELLLHEFRSGKI 266