Pairwise Alignments

Query, 373 a.a., chorismate synthase from Methanococcus maripaludis S2

Subject, 362 a.a., chorismate synthase from Synechococcus elongatus PCC 7942

 Score =  308 bits (789), Expect = 2e-88
 Identities = 164/364 (45%), Positives = 231/364 (63%), Gaps = 15/364 (4%)

Query: 2   NTFGDNFRVTTWGESHGKALGAVIDGCPANLPILEEDIQNELNRRRPGYSIFSTPRKEED 61
           ++FG  FR++T+GESHG  +G VIDGCP  L I E +IQ EL+RRRPG S  +TPRKE D
Sbjct: 3   SSFGHLFRISTFGESHGGGVGVVIDGCPPRLEISEAEIQFELDRRRPGQSKITTPRKEAD 62

Query: 62  MLEILSGIFEGKTTGTPISGLVFNKGQKSKDYSKIKDTPRPGHADLNYFLKYGNYDYRGG 121
             EILSG+ +GKT GTPI+ +V NK Q+S+DYS+++   RP HAD  Y  KYG     GG
Sbjct: 63  QCEILSGVVDGKTLGTPIAIVVRNKDQRSQDYSEMQVAYRPSHADATYDAKYGIRAVAGG 122

Query: 122 GRSSGRTTIGNVIGGAVAKKLIEFTHNIKIIGYSTKIGKINGDFDYYKNPEFFESDSNIE 181
           GRSS R TIG V  GA+AKKL+     ++I+GY  +I  + G  D    PE         
Sbjct: 123 GRSSARETIGRVAAGAIAKKLLREIAGVEIVGYVKRIKDLEGQID----PE--------T 170

Query: 182 KLFEKTENNPLRCPSKN-SDEMKDYVLDAMDKKDSVGGIIEIIIKGIPQGVGNPVFNKLE 240
              E+ E+  +RCP +  + +M D +     + DS+GG++E + + +P+G+G PVF+KLE
Sbjct: 171 VTLEQVESTIVRCPDEAIAPQMIDLIEAIGREGDSLGGVVECVARRVPRGLGEPVFDKLE 230

Query: 241 GKLGSAFIGINAVKGFEIGRGFESSDLYGSEMNDEYYIDE-NSINEKTNNAGGIIGGIST 299
             L  A + + A KGFEIG GF  +++ GSE ND +Y DE   I  +TN +GG  GGIS 
Sbjct: 231 ADLAKACMSLPATKGFEIGSGFAGTEMTGSEHNDAFYTDEQGQIRTRTNRSGGTQGGISN 290

Query: 300 GSPVVLRVSIKPTPSISKIQDSVNLISNENEKIEIGGRHDPIIVPRVIPVLESMAAITVA 359
           G  +V+RV+ KPT +I K Q++V   S E   +   GRHDP ++PR +P++E+M A+ + 
Sbjct: 291 GENIVIRVAFKPTATIRKEQETVT-NSGEATTLAARGRHDPCVLPRAVPMVEAMVALVLC 349

Query: 360 DLMI 363
           D ++
Sbjct: 350 DHLL 353