Pairwise Alignments

Query, 373 a.a., chorismate synthase from Methanococcus maripaludis S2

Subject, 364 a.a., chorismate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  294 bits (752), Expect = 3e-84
 Identities = 159/365 (43%), Positives = 225/365 (61%), Gaps = 26/365 (7%)

Query: 2   NTFGDNFRVTTWGESHGKALGAVIDGCPANLPILEEDIQNELNRRRPGYSIFSTPRKEED 61
           N+ G NF VTT+GESHGKALG +IDGCP  L I E D+Q++L+RRRPG S ++T R+E D
Sbjct: 4   NSIGQNFVVTTFGESHGKALGCIIDGCPPGLAIDEADMQHDLDRRRPGTSRYTTARREPD 63

Query: 62  MLEILSGIFEGKTTGTPISGLVFNKGQKSKDYSKIKDTPRPGHADLNYFLKYGNYDYRGG 121
            ++ILSG+FEG+TTGT I  ++ N  Q+S+DYS IKD  RPGHAD  Y  KYG  DYRGG
Sbjct: 64  QVKILSGVFEGQTTGTSIGLVIENTDQRSQDYSNIKDQFRPGHADYTYQQKYGLRDYRGG 123

Query: 122 GRSSGRTTIGNVIGGAVAKKLIEFTHNIKIIGYSTKIGKING---DFDYYKNPEFFESDS 178
           GRSS R T   V  GAVAKK ++  H I+I GY +++G I     DFD  ++  FF  D 
Sbjct: 124 GRSSARETAMRVAAGAVAKKYLKQVHGIEIKGYLSQLGPICAEILDFDQVEHNAFFFPD- 182

Query: 179 NIEKLFEKTENNPLRCPSKNSDEMKDYVLDAMDKKDSVGGIIEIIIKGIPQGVGNPVFNK 238
                            +   +++ +Y+ +     DS+G  + ++   +P G+G PVF++
Sbjct: 183 -----------------AAKLEQLDEYMRELKKSGDSIGAKVSVVATNVPVGLGEPVFDR 225

Query: 239 LEGKLGSAFIGINAVKGFEIGRGFESSDLYGSEMNDEYYIDENSINEKTNNAGGIIGGIS 298
           L+  +  A +GINAVKG EIG GF   +  GSE  D      +     +N+AGGI+GGIS
Sbjct: 226 LDADIAHALMGINAVKGVEIGDGFAVVNQKGSEHRDLM----SPEGFASNHAGGILGGIS 281

Query: 299 TGSPVVLRVSIKPTPSISKIQDSVNLISNENEKIEIGGRHDPIIVPRVIPVLESMAAITV 358
           +G P+V  +++KPT SIS   +S+  +  E  ++   GRHDP +  R +P+ E+M AI +
Sbjct: 282 SGQPIVAHIAMKPTSSISVPGESMT-VQGERAEVVTKGRHDPCVGIRAVPIAEAMLAIVL 340

Query: 359 ADLMI 363
            D ++
Sbjct: 341 MDHLL 345