Pairwise Alignments

Query, 373 a.a., chorismate synthase from Methanococcus maripaludis S2

Subject, 353 a.a., chorismate synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  286 bits (732), Expect = 6e-82
 Identities = 156/368 (42%), Positives = 224/368 (60%), Gaps = 30/368 (8%)

Query: 2   NTFGDNFRVTTWGESHGKALGAVIDGCPANLPILEEDIQNELNRRRPGYS---IFSTPRK 58
           NTFG  FR+TT+GESHG  LG V+DGCPA +P+ E  IQ EL+ RRPG +   +  T RK
Sbjct: 4   NTFGRIFRLTTYGESHGPGLGGVVDGCPAGVPLDESVIQRELDLRRPGSASAGLAGTARK 63

Query: 59  EEDMLEILSGIFEGKTTGTPISGLVFNKGQKSKDYSKIKDTPRPGHADLNYFLKYGNYDY 118
           E D + +LSG+FEG TTGTPI   + N+ Q+S+DY  +    RPGHAD+ Y  KYG  D+
Sbjct: 64  EPDTVRLLSGVFEGVTTGTPIGFHIANEDQRSRDYGDLAKLYRPGHADITYDAKYGLRDF 123

Query: 119 RGGGRSSGRTTIGNVIGGAVAKKLIEFTHNIKIIGYSTKIGKINGDFDYYKNPE---FFE 175
           RGGGR+SGR T+  V GGAVA  L+   H+I++  Y+ +IG +  D       +   FF 
Sbjct: 124 RGGGRASGRETVSRVAGGAVALALLAM-HDIEVRAYTVEIGGVPADVVDPAGAQGRLFFS 182

Query: 176 SDSNIEKLFEKTENNPLRCPSKNSDEMKDYVLDAMDKKDSVGGIIEIIIKGIPQGVGNPV 235
            D ++   +E                    V D   + D++GGI+++   G+P G+G PV
Sbjct: 183 PDPDVVPAWE------------------SLVHDVRAEGDTLGGIVQVEATGVPAGLGEPV 224

Query: 236 FNKLEGKLGSAFIGINAVKGFEIGRGFESSDLYGSEMNDEYYIDENSINEKTNNAGGIIG 295
           F+KL+  L  A + + AVK  E+G G E++ L GSE ND            TN+AGGI+G
Sbjct: 225 FDKLDALLAHAMMSVGAVKAVEVGAGLEAARLRGSENNDPIIPG----GFHTNHAGGILG 280

Query: 296 GISTGSPVVLRVSIKPTPSISKIQDSVNLISNENEKIEIGGRHDPIIVPRVIPVLESMAA 355
           GIS G P+V+R ++KP PSI++ Q +++  +     + +GGRHD   +PRV+PVL++MAA
Sbjct: 281 GISNGQPIVVRATVKPIPSIAQEQITID-TNGRPAPLRVGGRHDICAIPRVVPVLKAMAA 339

Query: 356 ITVADLMI 363
           + +AD ++
Sbjct: 340 LVLADSLL 347