Pairwise Alignments

Query, 373 a.a., chorismate synthase from Methanococcus maripaludis S2

Subject, 261 a.a., hypothetical chorismate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  232 bits (591), Expect = 1e-65
 Identities = 123/264 (46%), Positives = 162/264 (61%), Gaps = 21/264 (7%)

Query: 2   NTFGDNFRVTTWGESHGKALGAVIDGCPANLPILEEDIQNELNRRRPGYSIFSTPRKEED 61
           N+ G NF VTT+GESHG ALG +IDGCP  L + E D+Q++L+RRRPG S ++T R+E D
Sbjct: 4   NSIGQNFVVTTFGESHGVALGCIIDGCPPGLELTEADMQHDLDRRRPGTSRYTTARREPD 63

Query: 62  MLEILSGIFEGKTTGTPISGLVFNKGQKSKDYSKIKDTPRPGHADLNYFLKYGNYDYRGG 121
            + ILSG+FEGKTTGT I  L+ N  Q+S+DYS IKD  RPGHAD  Y  KYG  DYRGG
Sbjct: 64  EVRILSGVFEGKTTGTSIGLLIENTDQRSQDYSNIKDLFRPGHADYTYQQKYGLRDYRGG 123

Query: 122 GRSSGRTTIGNVIGGAVAKKLIEFTHNIKIIGYSTKIGKING---DFDYYKNPEFFESDS 178
           GRSS R T   V  GAVAKK ++  H I I GY +++G I     DF   +   FF  D+
Sbjct: 124 GRSSARETAMRVAAGAVAKKYLKQVHGISIQGYMSQLGPICAETLDFSQIEQNAFFFPDA 183

Query: 179 NIEKLFEKTENNPLRCPSKNSDEMKDYVLDAMDKKDSVGGIIEIIIKGIPQGVGNPVFNK 238
           +                    + + +Y+ +     DS+G  I ++   +P G+G PVF++
Sbjct: 184 S------------------KLEALDEYMRELKKSGDSIGAKISVVATNVPVGLGEPVFDR 225

Query: 239 LEGKLGSAFIGINAVKGFEIGRGF 262
           L+  +  A +GINAVKG EIG GF
Sbjct: 226 LDADIAHALMGINAVKGVEIGDGF 249