Pairwise Alignments

Query, 178 a.a., 30S ribosomal protein S4 from Methanococcus maripaludis S2

Subject, 206 a.a., 30S ribosomal protein S4 from Vibrio cholerae E7946 ATCC 55056

 Score = 49.3 bits (116), Expect = 4e-11
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 42/134 (31%)

Query: 20  GERIQKEKEISQKYGLVNKKELWKMETQLRNYRRQARKLISDTTTQGGKEAVQLFNVLKR 79
           G ++++++++ + YG++ K        Q RNY ++A +L  +T    G+  +QL      
Sbjct: 52  GVQLREKQKVRRIYGVLEK--------QFRNYYKEAARLKGNT----GENLLQL------ 93

Query: 80  YAILIEEEPTLDHVLSLNIESILERRLQTIVFRKGLAKTPKQARQFIVHGHIAVNGKRVT 139
                                 LE RL  +V+R G   T  +ARQ + H  I VNGK V 
Sbjct: 94  ----------------------LEGRLDNVVYRMGFGATRAEARQLVSHKAILVNGKVVN 131

Query: 140 APAYLISVAENDAI 153
            P++  +VA ND +
Sbjct: 132 VPSF--NVAANDVV 143