Pairwise Alignments

Query, 178 a.a., 30S ribosomal protein S4 from Methanococcus maripaludis S2

Subject, 206 a.a., 30S ribosomal protein S4 (RefSeq) from Shewanella loihica PV-4

 Score = 47.8 bits (112), Expect = 1e-10
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 42/134 (31%)

Query: 20  GERIQKEKEISQKYGLVNKKELWKMETQLRNYRRQARKLISDTTTQGGKEAVQLFNVLKR 79
           G ++++++++ + YG++ K        Q RNY + A +L  +T                 
Sbjct: 52  GVQLREKQKVRRTYGVLEK--------QFRNYYKDAARLKGNTGE--------------- 88

Query: 80  YAILIEEEPTLDHVLSLNIESILERRLQTIVFRKGLAKTPKQARQFIVHGHIAVNGKRVT 139
                            N+ ++LE RL  +V+R G   T  +ARQ + H  I VNG+ V 
Sbjct: 89  -----------------NLLTLLETRLDNVVYRMGFGATRAEARQLVSHKSIMVNGRVVN 131

Query: 140 APAYLISVAENDAI 153
            P++ +S   ND I
Sbjct: 132 IPSFKVSA--NDVI 143