Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 312 a.a., Predicted SAM-dependent methyltransferases from Pseudomonas stutzeri RCH2

 Score = 48.1 bits (113), Expect = 3e-10
 Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 14/132 (10%)

Query: 169 ETVISEGNAKFNVNM-KGHKTGFFLDQRDNRIDLENYVKPGDKVLDICSYTGGFAVHAGI 227
           E  ISE    + +++ +    G FLD R  R  ++ + + G +VL++ +YT GF+V A I
Sbjct: 109 EWQISENGLHYKLDLGRKQNNGLFLDMRYGRRWVQKHAQ-GKRVLNLFAYTCGFSV-AAI 166

Query: 228 KGG--EVTAVDLSEKALAVAEENMELN-----RVKNYNCMVSNAFDAMKEMIKNNEKFDV 280
            GG   V  +D++  AL    EN  LN     RV      +  ++  ++++      +D+
Sbjct: 167 AGGAEHVVNLDMASAALTRGRENHRLNGHDLGRVSFLGHELFKSWGKVRKL----GPYDL 222

Query: 281 VVLDPPAFTDSS 292
           +++DPP+F   S
Sbjct: 223 IIIDPPSFQKGS 234