Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 10/167 (5%)

Query: 133 IFECISEITDVET----MYVQSGKKGSDVKTKIFGDKSQIETVISEGNAKFNVNMKGH-K 187
           I     ++ DV+     + V+  +KG+    K+ G ++Q    I+E   K  VN+  +  
Sbjct: 467 IIRAAIQVLDVDANNVVLKVRERQKGTSQYEKL-GQQAQTMQ-ITEYGVKLIVNLYDYLD 524

Query: 188 TGFFLDQRDNRIDLENYVKPGDKVLDICSYTGGFAVHAGIKGGE-VTAVDLSEKALAVAE 246
           TG FLD +  R  L    + G   L++ +YTG   VHA   G +  T VD+S+  L  A+
Sbjct: 525 TGLFLDHKITRRRLGQMAQ-GKDFLNLFAYTGSATVHAACGGAKSTTTVDMSKTYLEWAK 583

Query: 247 ENMELNRVKNYNCMVSNAFDAMKEMIKNNEKFDVVVLDPPAFTDSSK 293
           ENM+LN           A D ++ +     ++D++ +DPP F++S +
Sbjct: 584 ENMQLNGQVGRQHQYVQA-DCLQWLANAQSQYDLIFIDPPTFSNSKR 629