Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 708 a.a., 23S rRNA m(2)G2445 methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score = 69.3 bits (168), Expect = 3e-16
 Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 23/261 (8%)

Query: 38  VDITYNGNFVAKALYDPKFPLIKILTRENEEIDKDFFFKRINNANNYRTDILNYKDTYRM 97
           VD T  G  +A        P    L +  ++++K    + I++   Y  DI  Y      
Sbjct: 388 VDTTGQGGEIAA-------PFANRLKKNLKQLEKWAKREGIDSYRLYDADIPEYN----- 435

Query: 98  IYAEADYLPSIILDKYNKIASIQ--ISSKIMDNYSDLIFECISEITDVETMYVQSGKKGS 155
             A   YL  +++ +Y   ++I   ++ + + +    +   +    D   +  +  +KG+
Sbjct: 436 -VAVDRYLDYVVVQEYAAPSAIPEAVTKRRLTDVLLALPRALGIDPDKIVLKTRERQKGT 494

Query: 156 DVKTKIFGDKSQIETVISEGNAKFNVNMKGH-KTGFFLDQRDNRIDLENYVKPGDKVLDI 214
           +   K+ G+K  +E V +E    F +N+  +  TG FLD R  R  +    K  D VL++
Sbjct: 495 NQYQKLDGEK--LELVTTEYGCSFKLNLTDYLDTGLFLDHRLTRKLVGEKAKNRD-VLNL 551

Query: 215 CSYTGGFAVHAGIKGG--EVTAVDLSEKALAVAEENMELNRVKNYNCMVSNAFDAMKEMI 272
            +YTG  +VHAG KGG   VT VD+S   L  A++N  LN +         A D ++ + 
Sbjct: 552 FAYTGSASVHAG-KGGAKSVTTVDMSNTYLNWAKDNFMLNGLIGRQYQFEQA-DCLQWIR 609

Query: 273 KNNEKFDVVVLDPPAFTDSSK 293
               +FD++ +DPP F++S +
Sbjct: 610 DCERQFDLIFIDPPTFSNSKR 630