Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 404 a.a., ribosomal RNA large subunit methyltransferase I from Phaeobacter inhibens DSM 17395

 Score =  128 bits (321), Expect = 3e-34
 Identities = 94/322 (29%), Positives = 154/322 (47%), Gaps = 13/322 (4%)

Query: 68  EIDKDFFFKRINNANNYRTDILNYKDTYRMIYAEADYLPSIILDKYNKIASIQISSKIMD 127
           EI++D+F  R++ A   R  + +    YR+ +AE+D LP +++D++     +Q ++   +
Sbjct: 84  EINQDWFETRLSRALALREQLYD-APYYRLAHAESDGLPGVVIDRFGDTCVVQPNAAWAE 142

Query: 128 NYSDLIFECISEITDVETMYVQ-SGKKGS-----DVKTKIFGDKSQIETVISEGNAKFNV 181
            + D + + +  +T V T+    SG+  S     DV T + G   +    ++   A +  
Sbjct: 143 AHLDALTDALVAVTGVTTVLKNASGRARSLEGLDDVSTTLRGTTPEAPVQVTMNGATYMA 202

Query: 182 NMKG-HKTGFFLDQRDNRIDLENYVKPGDKVLDICSYTGGFAVHAGIKG-GEVTAVDLSE 239
           ++ G  KTG F DQRDN       VKPG KVLD+ S+ GGF +     G  E T VD S 
Sbjct: 203 DLTGGQKTGLFYDQRDNHAFAAKLVKPGAKVLDVFSHVGGFGLAMLAAGAAEATCVDGSA 262

Query: 240 KALAVAEENMELNR-VKNYNCMVSNAFDAMKEMIKNNEKFDVVVLDPPAFTDSSKDIKNA 298
            AL +A E    +     +     +AF+ + ++ +   +FDVV+ DPPAF  S + ++  
Sbjct: 263 PALDLAREGAAASDFADRFAARQGDAFEVLTQLAEEGVQFDVVICDPPAFAPSKQALEAG 322

Query: 299 LNAYNSMNYLGLKLAK--RILVTCSCSHHIDRESFKHTIVSSSLRAKKEIRQIGSYRTQA 356
           L AY  +  L   L      L  CSCSH  D   F++       R  +  + + +    A
Sbjct: 323 LRAYERIAKLAAPLVAPGGCLGLCSCSHAADLSRFRNASARGIGRGGRRSQLLHTGYAGA 382

Query: 357 PDHIITMANKDLEYLKCLFFNV 378
            DH       +  YLK +FF +
Sbjct: 383 -DHPQLPQLAESGYLKAVFFRL 403