Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 314 a.a., N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score = 44.3 bits (103), Expect = 5e-09
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 16/135 (11%)

Query: 197 NRIDLENYVKPGDKVLDICSYTGGFAVHAG--IKGGEVTAVDLSEKALAVAEENME-LNR 253
           NR     Y KP +++LD+C+ +   A+      +  EV A+D+S  AL VA+ N+E L  
Sbjct: 123 NRFSPWLYNKPVNRILDLCTGSACIAIACAYEFEDAEVDAIDISSDALEVAQINIESLGV 182

Query: 254 VKNYNCMVSNAFDAMKEMIKNNEKFDVVVLDPPAFTDSSKDIKNALNAYNSMNYL----- 308
           +     + S+ F A    I    ++D++V +PP + D ++DI +    Y+    L     
Sbjct: 183 MDRVFPIESDMFAA----IPKGPQYDLIVSNPP-YVD-AEDIGDMPEEYHHEPELGLASG 236

Query: 309 --GLKLAKRILVTCS 321
             GL L KRIL   +
Sbjct: 237 RDGLDLTKRILANAA 251