Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis JJ

 Score =  730 bits (1885), Expect = 0.0
 Identities = 365/380 (96%), Positives = 373/380 (98%)

Query: 1   MSFQIDKRAYQSLKNFSNIIYKNAIVNKDDFSKTEEIVDITYNGNFVAKALYDPKFPLIK 60
           MSFQIDKRAYQSLKNFSNIIYK AIVNKDDFSK EEIVDI+YNGNFVAKALYDPKFPLIK
Sbjct: 1   MSFQIDKRAYQSLKNFSNIIYKKAIVNKDDFSKNEEIVDISYNGNFVAKALYDPKFPLIK 60

Query: 61  ILTRENEEIDKDFFFKRINNANNYRTDILNYKDTYRMIYAEADYLPSIILDKYNKIASIQ 120
           ILTR+NEEIDKDFFFKRINNANNYRTDILNYKDTYRMIYAEADYLPSIILDKYNKIASIQ
Sbjct: 61  ILTRKNEEIDKDFFFKRINNANNYRTDILNYKDTYRMIYAEADYLPSIILDKYNKIASIQ 120

Query: 121 ISSKIMDNYSDLIFECISEITDVETMYVQSGKKGSDVKTKIFGDKSQIETVISEGNAKFN 180
           ISS IMDNYSDLIFECISEITDVETMYVQSGKKGSDVKTKIFGDKSQIETVISEGNAKFN
Sbjct: 121 ISSNIMDNYSDLIFECISEITDVETMYVQSGKKGSDVKTKIFGDKSQIETVISEGNAKFN 180

Query: 181 VNMKGHKTGFFLDQRDNRIDLENYVKPGDKVLDICSYTGGFAVHAGIKGGEVTAVDLSEK 240
           VNMKGHKTGFFLDQRDNR DLENYVKPGDKVLDICSYTGGFAVHAGIKGGEVTAVDLS+K
Sbjct: 181 VNMKGHKTGFFLDQRDNRADLENYVKPGDKVLDICSYTGGFAVHAGIKGGEVTAVDLSDK 240

Query: 241 ALAVAEENMELNRVKNYNCMVSNAFDAMKEMIKNNEKFDVVVLDPPAFTDSSKDIKNALN 300
           ALAVAEENMELN VKNYNC+VSNAFDAMKEMI NNEKFDVVVLDPPAFTDSSKDIKNALN
Sbjct: 241 ALAVAEENMELNGVKNYNCIVSNAFDAMKEMIGNNEKFDVVVLDPPAFTDSSKDIKNALN 300

Query: 301 AYNSMNYLGLKLAKRILVTCSCSHHIDRESFKHTIVSSSLRAKKEIRQIGSYRTQAPDHI 360
           AYNSMNYLGLKLAKRILVTCSCSHHIDRE+FK+TIVSSS+RAKKEIRQIGSYRTQA DHI
Sbjct: 301 AYNSMNYLGLKLAKRILVTCSCSHHIDRENFKNTIVSSSIRAKKEIRQIGSYRTQASDHI 360

Query: 361 ITMANKDLEYLKCLFFNVVN 380
           ITMAN+DLEYLKCLFFNVVN
Sbjct: 361 ITMANRDLEYLKCLFFNVVN 380