Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 303 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 38/137 (27%), Positives = 73/137 (53%), Gaps = 5/137 (3%)

Query: 154 GSDVKTKIFGDKSQIETVISEGNAKFNVNM-KGHKTGFFLDQRDNRIDLENYVKPGDKVL 212
           G +  +++   +   + +++E  AKF V++ +G   G FLD  + R  +    +   K+L
Sbjct: 85  GGETFSQLLTGEVPEQHIVTENRAKFQVHLLRGQNHGLFLDMANGREWVRANARH-KKIL 143

Query: 213 DICSYTGGFAVHAGIKGG--EVTAVDLSEKALAVAEENMELNRVKNYNCMVSNAFDAMKE 270
           ++ +YT GF+V A ++GG  EV  +D+S+ ALA+ ++N  LN        + +       
Sbjct: 144 NLFAYTCGFSV-AALQGGADEVVNMDMSKGALAIGKQNHLLNDFTAGARFLGHDIFKSWG 202

Query: 271 MIKNNEKFDVVVLDPPA 287
            ++    +D+VV DPP+
Sbjct: 203 KLRKLGPYDIVVADPPS 219