Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 303 a.a., methyltransferase from Caulobacter crescentus NA1000

 Score = 45.1 bits (105), Expect = 3e-09
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 10/124 (8%)

Query: 175 GNAKFNVNMKGHK-TGFFLDQRDNRIDLENYVK-------PGDKVLDICSYTGGFAVHAG 226
           G AKF+      +   FF +Q  N    +  V+       P  KVL++  YTG  ++   
Sbjct: 90  GQAKFHGQFTPFRHLAFFPEQAANWAWQDERVRALCAGSGPQPKVLNLFGYTGVASLVCA 149

Query: 227 IKGGEVTAVDLSEKALAVAEENMELNRV--KNYNCMVSNAFDAMKEMIKNNEKFDVVVLD 284
             G  VT VD S+K++  A EN     +  K    +V +A   +   ++    +D ++LD
Sbjct: 150 AAGAAVTHVDASKKSVGFARENAAFAGLADKPIRWIVEDARKFVAREVRRGNTYDGIILD 209

Query: 285 PPAF 288
           PP F
Sbjct: 210 PPKF 213