Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 713 a.a., 23S rRNA m(2)G2445 methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 18/216 (8%)

Query: 93  DTYRMIYAEAD--------YLPSIILDKYNKIASIQ--ISSKIMDNYSDLIFECISEITD 142
           D+YR+  A+          YL  I++ +Y   ASI   ++ + + +    +   I     
Sbjct: 423 DSYRLYDADIPEYNVAVDRYLDHIVVQEYMAPASIPEAVTKRRLSDVLLALPAAIGVDPH 482

Query: 143 VETMYVQSGKKGSDVKTKIFGDKSQIETVISEGNAKFNVNMKGH-KTGFFLDQRDNRIDL 201
             TM  +  +KG++   K+  D+ ++E + +E  AKF +N+ G+  TG FLD R  R  L
Sbjct: 483 KITMKTRERQKGTNQYQKL--DERKLELITTEYGAKFKLNLTGYLDTGLFLDHRLTR-RL 539

Query: 202 ENYVKPGDKVLDICSYTGGFAVHAGIKGGE-VTAVDLSEKALAVAEENMELNRV--KNYN 258
                 G +VL++ SYTG  +VHA + G + VT VD+S   LA A+EN  LN +  K Y 
Sbjct: 540 VGQKSKGRRVLNLFSYTGSASVHAALGGAKSVTTVDMSNTYLAWAKENFALNDLSGKQYE 599

Query: 259 CMVSNAFDAMKEMIKN-NEKFDVVVLDPPAFTDSSK 293
            + ++    +++   + + ++D++ +DPP F++S +
Sbjct: 600 FVQADCLQWIRDSAHDKSAQYDLIFIDPPTFSNSKR 635