Pairwise Alignments

Query, 119 a.a., response regulator transcription factor from Methanococcus maripaludis S2

Subject, 249 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score = 80.1 bits (196), Expect = 2e-20
 Identities = 44/119 (36%), Positives = 73/119 (61%), Gaps = 3/119 (2%)

Query: 3   KILVVEDEEDILNLVRIILEINNYKVIVAHDGYQGLEM-VKENPDLILLDIMMPGMTGWE 61
           +ILV++D+  IL LV + LE++ Y V  A DG +G  + V+  PDLI+LD+M+P + G+ 
Sbjct: 4   RILVIDDDSAILELVAVNLEMSGYDVRKAEDGIKGQALAVQLVPDLIMLDLMLPRVDGFT 63

Query: 62  FLDKIRADGY--DIPVIVLTANAQMSTLETAINKKVDDCVVKPFDREDLMEKVNSILNK 118
              ++R D    +IPV++LTA  Q        N   DD + KPF+ E+++ +V ++L +
Sbjct: 64  VCQRLRRDERTAEIPVLMLTALGQTQDKVEGFNAGADDYLTKPFEVEEMLARVRALLQR 122