Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 1003 a.a., Phytochrome:GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:HWE histidine kinase from Pseudomonas syringae pv. syringae B728a

 Score =  147 bits (372), Expect = 2e-39
 Identities = 82/232 (35%), Positives = 133/232 (57%), Gaps = 7/232 (3%)

Query: 407 KELDKLKSELIAVVSHELRTPLTSIKGYVELVLDGTMGAI---NDSQKKCLQVADDNIVR 463
           +E  +L+ EL+AVVSH+LR P++ I     ++    +G     N + ++ L   +    R
Sbjct: 536 QEAVRLRDELVAVVSHDLRNPMSIIIMQCGMMQSWAVGDTHFENRNIRRALGTIEKATTR 595

Query: 464 LRRLIESMLDLSKIERGELEMYREKVNLRSIVCDVIEYLKPLATEKNIKLN-KEVEDIAI 522
           +  L+E +LD ++IE G  ++ R  +++ S++ +    L  L TEKNI+LN    + + I
Sbjct: 596 MNSLLEDLLDTAQIEAGRYQLSRLPLSVTSLLEEACSLLVMLTTEKNIELNCTAAQGLVI 655

Query: 523 EADKDRITQVLTNLIENAIKFSPANESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFN 582
           +AD +RI QVL+NL+ NAIKF+P    I +  V +   +  +V+D G GIP + +  IF 
Sbjct: 656 DADPERIFQVLSNLVGNAIKFTPKGGRINIDAVADQNEVLFRVSDDGIGIPAEHLPFIFQ 715

Query: 583 RFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVESELGKGSTFHIILPI 634
           R++ V     R   G+GLGL +C+ I+ AH G +W +S L  GS F   LP+
Sbjct: 716 RYWSVKEGNPR---GNGLGLYICQGIITAHGGRLWADSSLDSGSVFSFTLPV 764