Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 637 a.a., GAF sensor signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score =  144 bits (362), Expect = 2e-38
 Identities = 91/271 (33%), Positives = 155/271 (57%), Gaps = 19/271 (7%)

Query: 373 ELAKAFNKMATQINISDDKLKKHAEELKISYNELKELDKLKSELIAVVSHELRTPLTSIK 432
           ELA+A   +ATQI ++  + +        ++ +L+ L++ +S L A++ HELRTPL++++
Sbjct: 371 ELAEA---IATQIGVALIQAQ--------TFRQLENLERTRSNLTAIIGHELRTPLSTVQ 419

Query: 433 GYVE-LVLDGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNL 491
             +E L  +  M A  D ++  LQ A D+  RLR L++  L LS++E G ++ + E + L
Sbjct: 420 VCLESLATEPDMSA--DLRQVMLQTALDDAERLRLLVQDFLTLSRLESGRIDWHPESLAL 477

Query: 492 RSIVCDVIEYLKPLATEKNIKLNKEVEDIA---IEADKDRITQVLTNLIENAIKFSPANE 548
              V   +  L+      ++   ++    +   +  D D + +VL  L++NA KF+ A  
Sbjct: 478 DECVAMAMSGLRSRHQRDSLPSIEQKLPASLPLVRVDGDWLVEVLIKLLDNACKFTSAQG 537

Query: 549 SILVSGVLE-DEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKS 607
            + ++ V+E D  + + +TD G GI    +E +F+RFYQ D + +R +GGSGLGLA+C+ 
Sbjct: 538 HVSITAVVEGDRALRVAITDDGRGIEPDRLEAVFDRFYQEDGALRRSQGGSGLGLAICRQ 597

Query: 608 IVEAHKGSIWVESE-LGKGSTFHIILPISAK 637
           IVE   G IW ESE   +GS F   LP++ +
Sbjct: 598 IVERLGGHIWAESEGRDRGSCFQFTLPLATR 628