Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 482 a.a., histidine kinase from Synechococcus elongatus PCC 7942

 Score =  154 bits (389), Expect = 9e-42
 Identities = 97/313 (30%), Positives = 171/313 (54%), Gaps = 27/313 (8%)

Query: 323 LIGLLIALIVSYLINRGIIKPLEQLKQGAEWVS--NGRYDQKVIVDSDDEFGELAKAFNK 380
           L+  LI +I S +  R  + P++++ Q A  +S  +   D   +  + +E   LAKAFN 
Sbjct: 189 LVFTLIVVIASRI--RRAMAPIKEISQIASNISIIDLGADPLELRHAPEEILGLAKAFND 246

Query: 381 MATQINISDDKLKKHAEELKISYNELKELDKLKSELIAVVSHELRTPLTSIKGYVELVLD 440
           M  +++IS ++                     + + +  VSHEL+TPLT I GY++ +L 
Sbjct: 247 MLNRLSISWEQ---------------------QQQFVGNVSHELKTPLTVISGYLQSLLR 285

Query: 441 GTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRSIVCDVIE 500
                +N  Q + L+ A     R  R+++ +LDL++++ G L        L +++ +V E
Sbjct: 286 RGDN-LNSYQNQALETASAEAERTIRMLQDLLDLARVDSGNLHFRLMPTVLNTLIAEVAE 344

Query: 501 YLKPLATEKNIKLNKEVEDIAIEADKDRITQVLTNLIENAIKFSPANESILVSGVLEDEH 560
             + + T + I +     +I + AD++R+ Q L NL++NA K+S  ++ + ++    ++ 
Sbjct: 345 MTRRV-TGRQIIMQTPKSEIVVYADQNRLEQALINLLDNAAKYSNQDQVVYINLEQSNQQ 403

Query: 561 IHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVES 620
             + + D+G GIP     +IF RFY+VD +  R + G+GLGLA+ KS++E  +G I + S
Sbjct: 404 TLIHIIDQGVGIPLAHQSRIFERFYRVDEAMTRSRDGTGLGLAIAKSLIEGMQGKITLRS 463

Query: 621 ELGKGSTFHIILP 633
           +LG+GSTF IILP
Sbjct: 464 KLGEGSTFTIILP 476