Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 754 a.a., GAF sensor hybrid histidine kinase from Synechococcus elongatus PCC 7942

 Score =  146 bits (368), Expect = 4e-39
 Identities = 82/264 (31%), Positives = 147/264 (55%), Gaps = 6/264 (2%)

Query: 375 AKAFNKMATQINISDDKLKKHAEELKISYNELKELDKLKSELIAVVSHELRTPLTSIKGY 434
           A+ + ++  Q    ++++ +  +EL  +    +  +  K E +A +SHELRTPLT + G 
Sbjct: 346 AQLYGQLQDQTQTLENRVLERTQELIDALALAQAANAAKGEFLATMSHELRTPLTCVIGM 405

Query: 435 VELVLDGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRSI 494
              +L    G + + Q++ ++   D+   L  LI  +LDLS+IE G+  +     +L  +
Sbjct: 406 SSTLLRWAFGPLTERQREYIKAIHDSGEHLLELINDILDLSQIEAGKAALQVRPFSLSRL 465

Query: 495 VCDVIEYLKPLATEKNIKLNKEVE-----DIAIEADKDRITQVLTNLIENAIKFSPANES 549
               +  L+  A    I+L  +++     D+   AD  R+ Q+L NL+ NA+KF+    +
Sbjct: 466 ATQTLNTLQEKARLGEIQLMLDLQLNNRVDV-FRADPKRLRQILINLLSNAVKFTEPQGT 524

Query: 550 ILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIV 609
           + +    E +    +V+D G GIP+ +  ++F +F Q+D+S +R+ GG+GLGLA+ K +V
Sbjct: 525 VFLRVWREGDRAIFQVSDTGIGIPESEQAQLFQKFQQLDTSIRRQYGGTGLGLALTKQLV 584

Query: 610 EAHKGSIWVESELGKGSTFHIILP 633
           E H G I +ES +G+GSTF + +P
Sbjct: 585 ELHGGHIQIESTVGQGSTFTVWIP 608