Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 708 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  179 bits (455), Expect = 3e-49
 Identities = 150/570 (26%), Positives = 273/570 (47%), Gaps = 70/570 (12%)

Query: 128 DNSYEDLFKKVVNSTGYTSIEVLDKDSIKYEN--VGELVNIDIKGTEDSINYSDSVQDSA 185
           D     L  KV     +T + VL    +   +  + E   + +  T  +       +D  
Sbjct: 134 DPDLRHLLTKVKGGEPFTGLMVLSSKRLARLDPVLAERARLTLLPTPRADVPDRDAEDRG 193

Query: 186 MALVSIEPIYDKNGKLLGAAMAADILNKDYSIVDTVKDASKD----------ATTIFLDG 235
           M   S+ PI D  G++        +LN+D  IVD ++D   D            TIFLD 
Sbjct: 194 MLSRSLMPIVDSEGEVAWYLDGGTLLNRDTRIVDHIRDLVYDKGTLPERSIGTVTIFLDN 253

Query: 236 VRVSTNVQ--------DNGGRAIGTLVSEEVYNHVVLDGKTYYGRAFVVNEWYLTAYEPI 287
           VR+STNV         ++ GRA+G+LVSEEV + V+  G+T+  RAFV N+W+++AY P+
Sbjct: 254 VRISTNVPLHFFPRDGEDKGRALGSLVSEEVKHKVLTQGQTWVDRAFVYNDWFISAYAPL 313

Query: 288 YDSDNKIIGMLFVGTPESKFLALQADVRNQTFVVGLIGLLIALIVSYLINRG---IIKPL 344
            D   + IGM++ G  E+ F+    +       +G I +L+ L+   L+ RG   +++P+
Sbjct: 314 TDVRGERIGMIYTGFSEAPFI---HNYLLNIIELGTILMLVLLVSGMLVYRGAYSLLQPI 370

Query: 345 EQLKQGAEWVSNGRYDQ--KVIVDSDDEFGELAKAFNKMATQINISDDKLKKHAEELKIS 402
           E++    + V +GR  +  ++ ++ D+E   LA+ F++M   +   + +++  AE+L++ 
Sbjct: 371 ERIHHVVKAVQSGRNVRIGELGLEKDNELANLAEQFDRMLDLLQRRNAQIQSAAEQLELK 430

Query: 403 YNE--------LKELDKLKS-------------------ELIAVVSHELRTPLTSIKGYV 435
             E         +EL +  S                   EL A ++HE+  P   I G +
Sbjct: 431 VEERTRSLQEKTEELQRNVSLLNETRAQLVTNEKLTALGELTAGIAHEINNPTAVILGNM 490

Query: 436 ELVLDGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRSIV 495
           EL L   +G      ++ + +    + R+  +I S+L  S+   GE     E   +  I+
Sbjct: 491 EL-LRSELGDKAGQVEEEIDLVIQQVGRISTIIRSLLQYSR--PGEFNAPLEMHQITPII 547

Query: 496 CDVIEYLKPLATEKNIKLNKEVE-DIAIEADKDRITQVLTNLIENAIKFSPANESILV-- 552
            +++  ++    ++ + L++E+     ++ ++ ++ QVL NL+ NA         I +  
Sbjct: 548 EEMLVLVRHSIKKQEVVLHQELNASCPVQINRPQLLQVLINLVVNAAHAMDGKGRIWIRT 607

Query: 553 -SGVLEDEHIHLK--VTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIV 609
              V++DE + +K  + D G GI  + + +IF+ FY        +  G+GLGL++   I+
Sbjct: 608 YDWVVQDEPVGVKIEIEDEGCGIAPEQLGRIFDPFYTT------RPDGTGLGLSLSYGII 661

Query: 610 EAHKGSIWVESELGKGSTFHIILPISAKDQ 639
           +   G+I V S LGKG+ F I L   A+++
Sbjct: 662 KRIGGTIEVTSTLGKGTLFTIGLYHEAREE 691