Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score =  146 bits (369), Expect = 5e-39
 Identities = 87/270 (32%), Positives = 144/270 (53%), Gaps = 3/270 (1%)

Query: 368 DDEFGELAKAFNKMATQINISDDKLKKHAEELKISYNELKELDKLKSELIAVVSHELRTP 427
           DD   ++     + + ++  S+ KLK+   EL I Y + +ELD +K++  A VSHELRTP
Sbjct: 170 DDIVRQMEAEIFQRSKEVAKSNLKLKEANSELAILYEKTRELDDIKTQFFANVSHELRTP 229

Query: 428 LTSIKGYVELVLDGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYRE 487
           LT I G V    +     +  ++K+ L +   N   L R +  +LD++K+E G++ M   
Sbjct: 230 LTLILGPVTSRQEDP--TLAPAEKRVLDMVARNARLLLRHVNDLLDIAKLEAGQMRMQYV 287

Query: 488 KVNLRSIVCDVIEYLKPLATEKNIKLNKEVEDIA-IEADKDRITQVLTNLIENAIKFSPA 546
           + ++  +    + +   LA E+ I    E   +   E D ++  +VL NL+ NA KF+P 
Sbjct: 288 RTDVTRLCRFALSHFDSLAEERAIAFTLEAPAVLWAEIDPEKFRRVLLNLLSNAFKFTPN 347

Query: 547 NESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCK 606
              I VS +   + + L+V+D G GIP+     +F RF QVD  + R+ GG+GLGLA+ +
Sbjct: 348 QGEITVSLIDRGDDVILRVSDNGPGIPESMWTAVFERFRQVDGGSDRRHGGTGLGLAIVR 407

Query: 607 SIVEAHKGSIWVESELGKGSTFHIILPISA 636
             V+ H G + +      G+ F ++LP  A
Sbjct: 408 EFVDLHGGEVSIGQASEGGAAFTVVLPKKA 437