Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 709 a.a., histidine kinase,HAMP domain-containing protein,histidine kinase from Dechlorosoma suillum PS

 Score =  177 bits (449), Expect = 1e-48
 Identities = 149/631 (23%), Positives = 292/631 (46%), Gaps = 56/631 (8%)

Query: 48  KINDDLNTAESVVNLKLDKISSLNKYIISNDNTITSLKNNNTAELKTLAISYKNTSAPDF 107
           K++ DL TA    +     +S   +   S+   + +L+     ++  L          D+
Sbjct: 65  KVSSDLVTARQFFDRVQSGVSLNLEGFSSSHRLLQALQRGAPDDMDLLLQEAALAQGLDY 124

Query: 108 VVFFDGQGNVVARSNSDVTGDNSYEDLFKKVVNSTGYTSIEVLDKDSIKY--ENVGELVN 165
           +V  D  G V A     V  D S  D+ +  +   G   +EV   + +      + +  +
Sbjct: 125 LVLLDSHGRVRAGGRGPV--DRSAWDVVQSALQGRGQHGLEVFAPEQLDELAPALRQRAH 182

Query: 166 IDIKGTEDSINYSDSVQDSAMALVSIEPIYDKNGKLLGAAMAADILNKDYSIVDTVKD-- 223
           +D+  T ++       +D  + + +  P+    G++LG      +LN +  IVD +    
Sbjct: 183 LDLLPTRNASPDPRRAEDRGLVIQAAVPVLGSEGQMLGVLEGGVLLNGNLGIVDRINTIV 242

Query: 224 --------ASKDATTIFLDGVRVSTNVQ-DNGGRAIGTLVSEEVYNHVVLDGKTYYGRAF 274
                    S+   T+FL   R++TNV+   G RA+GT VS+ V + V+  G+ + G AF
Sbjct: 243 YQQASLPLGSQGTATLFLGDTRIATNVRLFEGRRALGTRVSQAVRDKVLGRGEVWLGSAF 302

Query: 275 VVNEWYLTAYEPIYDSDNKIIGMLFVGTPESKFLALQADVRNQTFVVGLIGLLIALIVSY 334
           VV++ Y++ YEP+ +   + +GML+VG  E+             F++ L+   +  + + 
Sbjct: 303 VVDDTYVSGYEPLLNLRGERVGMLYVGFLEAPLQTALHGALAGLFLLFLLVSGLGTLAAL 362

Query: 335 LINRGIIKPLEQLKQGAEWVSNGRYDQKVIVD-SDDEFGELAKAFNKMATQINISDDKLK 393
              + I +P+E++ +    +  G    +V    S DE G L++AF+ +   ++    +L+
Sbjct: 363 RWAQTIFRPIERMNRVMARIEAGEETARVGPSASKDELGRLSRAFDHLLDSLSARRLELQ 422

Query: 394 KHAEE------------------LKISYNELKELDKLKS--ELIAVVSHELRTPLTSIKG 433
           + A+E                  L+ +  +L   +KL +  EL A V+HE+  P+  I+G
Sbjct: 423 RSADELDRKVAERTAALEEANATLRRAQQQLVMNEKLTAIGELTAGVAHEINNPVAVIQG 482

Query: 434 YVELVLDGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRS 493
            +EL+ D  +G   +  +  +++ D+   R+R ++  +L  ++   G+   Y E  ++  
Sbjct: 483 NLELLRD-VLGEQAEPVRGEIRLIDEQTQRIRAIVTRLLQFAR--PGDFAGYAEATDVNG 539

Query: 494 IVCDVIEYLKPLATEKNIKLNKEVEDIA-IEADKDRITQVLTNLIENAIKFSPANESI-- 550
           +V D +   +    +  +K+   +E    +E ++  + QVL NL+ NA++  P   ++  
Sbjct: 540 VVADCLVLTRHNLNKAGVKVETRLEACCNVEMNRGELQQVLINLMMNAMQAMPQGGTLSM 599

Query: 551 ---------LVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLG 601
                     + G        L+V D G GI   D+++IF+ F+     T +K+ G+GLG
Sbjct: 600 ESRDIGPGDAIPGEASFPGALLRVRDTGHGIAPADLDRIFDPFF-----TTKKQEGTGLG 654

Query: 602 LAVCKSIVEAHKGSIWVESELGKGSTFHIIL 632
           L++  +I++ + G I VES  G+ +TF + L
Sbjct: 655 LSISYAIIQRYGGRISVESAPGEHTTFTLWL 685