Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 858 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  143 bits (360), Expect = 4e-38
 Identities = 87/254 (34%), Positives = 147/254 (57%), Gaps = 11/254 (4%)

Query: 393 KKHAE-ELKISYNELKELDKLKSELIAVVSHELRTPLTSIKGYVELVLDGTMGAINDSQK 451
           +K AE EL+ +  + +  ++ KSE +A +SHE+RTP T I G ++L+L   +   N+ Q+
Sbjct: 333 RKAAESELRHAREKAEAANRAKSEFLANMSHEIRTPFTGILGVLDLLLHTPL---NEKQE 389

Query: 452 KCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRSIVCDVIEYLKPLATEKNI 511
           + +++A  +  +L  ++  +LD+SKIE G+L ++ E+V+L  ++ ++ E     A +K +
Sbjct: 390 RYIRLAYGSTKQLLAILNDILDISKIEAGKLVIHPEEVDLVLLLGELTEVQAAAAAQKGL 449

Query: 512 KLNKEVEDIA---IEADKDRITQVLTNLIENAIKFSPANESILVSGVLE----DEHIHLK 564
           +    ++ I    I  D  R+ Q++ NL+ NAIKF+ +    L           +H+ ++
Sbjct: 450 EFRYHIKGIIPPKIHGDPVRLRQIMANLLNNAIKFTNSGWVELDIECTRIAPGRQHLRVE 509

Query: 565 VTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVESELGK 624
           V D G G+P +  E IF++F Q DSST R  GG+GLGL +CK +VE   GSI V S  G+
Sbjct: 510 VRDSGIGVPPELQETIFDKFTQADSSTTRLFGGTGLGLTICKQLVELMHGSIGVSSNSGE 569

Query: 625 GSTFHIILPISAKD 638
           GS F   + +   D
Sbjct: 570 GSCFWFDIELPESD 583