Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 614 a.a., ATP-binding protein from Methanococcus maripaludis JJ

 Score =  458 bits (1179), Expect = e-133
 Identities = 259/632 (40%), Positives = 387/632 (61%), Gaps = 29/632 (4%)

Query: 7   IKRLGTKLIIYSIITALIPIVMLGAVSTDTINTEMTKQAQEKINDDLNTAESVVNLKLDK 66
           I  +GTKL+I+SII  LIPIVM+  VSTDTI+  MT   + +++ +L      ++  L +
Sbjct: 6   IGMIGTKLLIFSIIIVLIPIVMMSYVSTDTISDLMTSNQESELDINLGILNERMDSVLVE 65

Query: 67  ISSLNKYIISNDNTITSLKNNNTAELKTLAISYKNTSAPDFVVFFDGQGNVVARSNSDVT 126
             ++  Y  +    + ++KNN+   L+  A   ++ S  D  VF D  GNV+  S  D  
Sbjct: 66  FDTMTAYTANLPVVVNAVKNNDKDTLQDFANGLEDQSWIDLAVFTDADGNVICASYGD-- 123

Query: 127 GDNSYEDLFKKVVNSTGYTSIEVLDKDSIKYENVGELVNIDIKGTEDSINYSDSVQDS-- 184
            D       KK+           L+K++I           DI   E++  YSD   D   
Sbjct: 124 DDAEISSYVKKL-----------LEKNTI--------YAYDILPNEEASKYSDYELDGHD 164

Query: 185 AMALVSIEPIYDKNGKLLGAAMAADILNKDYSIVDTVKDASKDATTIFLDGVRVSTNVQD 244
           A+ + ++ PIYD +  L+GA    DI+NKD   VD +K+ + D  +I+L+ VR+ST  Q 
Sbjct: 165 ALTIFTVAPIYDGDS-LIGAVTYVDIMNKDDYWVDRIKEVTGDEASIYLNNVRISTTCQK 223

Query: 245 NGGRAIGTLVSEEVYNHVVLDGKTYYGRAFVVNEW--YLTAYEPIYDSDNKIIGMLFVGT 302
           +G   +G L  E++Y  V    K    R+ V      YL  Y PIY+ D ++IGM  VGT
Sbjct: 224 DGVDFVGELADEDIYETV---SKKQDVRSTVTINGVPYLAKYSPIYNIDGEVIGMTCVGT 280

Query: 303 PESKFLALQADVRNQTFVVGLIGLLIALIVSYLINRGIIKPLEQLKQGAEWVSNGRYDQK 362
           P+S F  L   V  + F +    L+IA+ V+ ++N+ I+  +++LK  AE    G YD++
Sbjct: 281 PKSPFTVLLNSVIQKIFFIAFSSLIIAVFVAVILNKKIVDSIKKLKNSAESFGRGNYDER 340

Query: 363 VIVDSDDEFGELAKAFNKMATQINISDDKLKKHAEELKISYNELKELDKLKSELIAVVSH 422
             +D+ DE  ELA++FNKMA +I  SD KLK  A  LK S++ELKE+D LKSE++++VSH
Sbjct: 341 ASIDTGDELEELAESFNKMADEIRKSDKKLKSDAHTLKTSFDELKEVDNLKSEILSIVSH 400

Query: 423 ELRTPLTSIKGYVELVLDGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGEL 482
           ELRTPLT+I GYVEL+ D T G +++ QK+ + V  +N  RL+R+ ++M DL  ++   L
Sbjct: 401 ELRTPLTAILGYVELLKDETAGKLSEKQKEFISVISENSDRLKRITDNMSDLVTVDNKIL 460

Query: 483 EMYREKVNLRSIVCDVIEYLKPLATEKNIKLNKEVEDIAIEADKDRITQVLTNLIENAIK 542
           ++ R+K+NL+  V D++      A  KNI L ++V+++ I+ DK +I QVL+NLIENAIK
Sbjct: 461 DIKRDKINLKKEVNDILRSFDYFAESKNIVLLEDVDNLDIKGDKSKIHQVLSNLIENAIK 520

Query: 543 FSPANESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGL 602
           FS     + V G  +  +IHL++TD+G GIPK+ + KIF++FYQ+DSS+KR+ GGSGLGL
Sbjct: 521 FSKKQTKVTVMGFEDKGNIHLEITDQGPGIPKEHLGKIFDKFYQIDSSSKREVGGSGLGL 580

Query: 603 AVCKSIVEAHKGSIWVESELGKGSTFHIILPI 634
           AVCK IVE+H GSIWVES++GKG+T H++ P+
Sbjct: 581 AVCKKIVESHGGSIWVESKIGKGTTVHVMFPL 612