Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 1019 a.a., sensor histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  149 bits (377), Expect = 5e-40
 Identities = 85/250 (34%), Positives = 147/250 (58%), Gaps = 7/250 (2%)

Query: 389 DDKLKKHAEELKISYNELKELDKLKSELIAVVSHELRTPLTSIKGYVELVLDGTMGAIND 448
           +++++K  +EL+   ++  +L  +K+  +A +SHE+RTP+T IKG+ E +L  T G +++
Sbjct: 535 EERVEKRTKELEQERDKANQLAAVKARFLANMSHEIRTPITIIKGFTEQILPNTQGEVHN 594

Query: 449 SQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRSIVCDVIEYLKPLATE 508
           +  K  Q    N + L+ +I  +LD +KI+ G++ +  + V +  ++  + + +K LA  
Sbjct: 595 ALCKIEQ----NTLHLQNVINDILDAAKIDEGKMTIAEQTVAIIPLLNSLSDSMKFLART 650

Query: 509 KNI--KLNKEVEDIA-IEADKDRITQVLTNLIENAIKFSPANESILVSGVLEDEHIHLKV 565
           KN+  +LN ++ DI  I  D  R+ Q+L N I NA+KF+P     LV+ +   + + + V
Sbjct: 651 KNLTTELNIDIADIEHIITDPFRLKQILLNFISNAVKFTPKGTVKLVANITNADELCIAV 710

Query: 566 TDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVESELGKG 625
            D+G GI  +    +F  F Q DSST R  GG+GLGL + K + +A    + ++SELG G
Sbjct: 711 IDKGIGISDQQASTLFEAFTQADSSTSRDFGGTGLGLFISKQLADAMFIKLHMQSELGVG 770

Query: 626 STFHIILPIS 635
           S F + LP S
Sbjct: 771 SCFSVTLPES 780