Pairwise Alignments

Query, 387 a.a., Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain from Methanococcus maripaludis S2

Subject, 462 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 285 KCIKCYGCRDVCPVCFCRECALTADYVDTGSIPPDPIMFQGVRMSHMAFSCVNCGQCEDV 344
           KCI+C GC + CPV + R    + +Y   G I    +  Q      + ++C  CG C  V
Sbjct: 310 KCIRCGGCLNTCPV-YRRSGGYSYNYTIPGPIGI-AVGAQADDTHSIPWACTLCGSCSYV 367

Query: 345 CPMEIPVARIFH 356
           CP ++P+ +I H
Sbjct: 368 CPTKVPLDKIIH 379



 Score = 23.9 bits (50), Expect = 0.010
 Identities = 6/16 (37%), Positives = 10/16 (62%)

Query: 332 AFSCVNCGQCEDVCPM 347
           +  C+ CG C + CP+
Sbjct: 308 SLKCIRCGGCLNTCPV 323