Pairwise Alignments

Query, 387 a.a., Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain from Methanococcus maripaludis S2

Subject, 359 a.a., Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain from Methanococcus maripaludis JJ

 Score = 71.2 bits (173), Expect = 4e-17
 Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 30/236 (12%)

Query: 20  ECGGAVTALFKYLLDKGIVDGVLALKKGVDVYDAIPTFVTSSEDLLSTAGSLHCAPTMWG 79
           + GG VTA+     D+ ++DG + + +     D      TS ED+L TAGS +     W 
Sbjct: 116 QSGGVVTAILANAFDEDLIDGAIVMMEDKWTMDPKSYLATSKEDVLKTAGSRY----NWN 171

Query: 80  GIIKEYLQDA-------KIAVPVKPCDMRAIVELAKRAQINLDNV--------YMIGLNC 124
             I E L++A       KIAV   PC + A+ ++      N D V          I L C
Sbjct: 172 VPILEVLKEAVMVKKLNKIAVVGTPCVINAVYQM---MATNNDLVEPFKKAIRLKISLFC 228

Query: 125 GGTVPPKTAMEMIKLFYEVDPKDVVKEEIDKGKFIIVMKDGSHKEVKMHDLEDNGYGRRV 184
             T      ++ +K   EV+P D+ K EIDKGK I+    G+    K+ ++++  Y R+ 
Sbjct: 229 FETFDYDKMLKKLK-EVEVNPWDIKKMEIDKGKLIVSTIHGNVFNFKIDEMDE--YVRK- 284

Query: 185 NCQRCDEKIPRKADIAAGNWGVIGEDAGKYTFMEVCTEKGKQLLKDAEKDGYVKTK 240
            C+ C +     +DI+ GN   +G   G Y+ + V  + GK        +GYV  +
Sbjct: 285 GCKVCRDFTGISSDISVGN---VGTPEG-YSTVLVRNKWGKGFFDRTVINGYVSVE 336



 Score = 31.2 bits (69), Expect = 5e-05
 Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 20/82 (24%)

Query: 277 EEWNRQWNKCIKCYGCRDVCP-----------VCF-CRECALTADYVDTGSIPPDPIMFQ 324
           E W+R+   C  C  C  VCP           V F C ECA      + G  P       
Sbjct: 10  EVWDRE--TCSGCGACVSVCPTENIYFKQQSPVQFDCDECACIIVPTENGESPIS----- 62

Query: 325 GVRMSHMAFSCVNCGQCEDVCP 346
                 +    VNCG C + CP
Sbjct: 63  -AEFCKVTLYDVNCGACYNACP 83



 Score = 25.0 bits (53), Expect = 0.003
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query: 334 SCVNCGQCEDVCPME 348
           +C  CG C  VCP E
Sbjct: 16  TCSGCGACVSVCPTE 30