Pairwise Alignments

Query, 425 a.a., UbiD family decarboxylase from Methanococcus maripaludis S2

Subject, 488 a.a., conserved hypothetical protein TIGR00148 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  119 bits (298), Expect = 2e-31
 Identities = 97/321 (30%), Positives = 151/321 (47%), Gaps = 12/321 (3%)

Query: 95  DDLEKIHDYPIPTYYGKDAGPYLTSGVVIVKD-KDEGVNASIHRILVRPDGNLAIRMVEQ 153
           DD++ +   PI   +  D  P +T G+ I K  +    N  I+R  +     L +R +  
Sbjct: 135 DDVD-LTQLPIQHCWPGDVAPLVTWGLTITKGPRKSRQNLGIYRQQLLGKNKLIMRWLSH 193

Query: 154 RH--LHYIYNKNIGNGE-VDCAIVIGVHPAVLLAASTSGDVSFNELKYASALINKPLNLV 210
           R   L +   K    GE     + +G  P  +L A T    + +E  +A  L  +   + 
Sbjct: 194 RGGALDFADFKEQFPGERYPVVVALGSDPVTILGAVTPVPDAMSEYAFAGLLRGERTEVC 253

Query: 211 KCKTVDLEVP-EAEFIIEGKITA-EMVDEGPFVDITGTYDVIRKQPLIKVTALRRKEDAI 268
           K  + DLEVP  +E I+EG I   EM +EGP+ D TG Y+   K P+  VT +  ++D I
Sbjct: 254 KALSCDLEVPASSEIILEGYIDPNEMAEEGPYGDHTGYYNETDKFPVFTVTHITHRKDPI 313

Query: 269 FHALLPGGS-EHKLLMGIPQEPRMYKGIRNTVPSLKNVALTQGGCCWLNAVVSIDKKTEG 327
           +H+   G   +   ++G+         +R   P + +  L   GC +  AV+SI K+  G
Sbjct: 314 YHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIIDFYLPPEGCSYRMAVISIRKQYPG 373

Query: 328 DGKNAILAA---LAAHPSLKHVTVVDDDINIYDANDVEYAVATRVQSDKDIIIIPGAKGS 384
             K  ++ A   L      K + VVDDD+N  D NDV +A+ TR+   +D ++I      
Sbjct: 374 HAKRVMMGAWSFLRQFMYTKFIVVVDDDVNCRDWNDVIWAITTRMDPKRDTVMIDNTPID 433

Query: 385 SLDPSADHKNKLTAKMGIDAT 405
            LD  A     L +KMG+DAT
Sbjct: 434 YLD-FASPVVGLGSKMGLDAT 453