Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 590 a.a., Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  278 bits (712), Expect = 3e-79
 Identities = 195/555 (35%), Positives = 288/555 (51%), Gaps = 48/555 (8%)

Query: 4   DVLIIGGGGAAARAAIEC---GQKNVVIASKGLFGKSGCTVMAEGGYNAVL---NEKDSF 57
           D +IIGGGGA  RAA++    G K  VI    +F     TV A+GG    +   +  D +
Sbjct: 10  DAIIIGGGGAGMRAALQLAQGGHKTAVITK--VFPTRSHTVSAQGGITCAIASADPNDDW 67

Query: 58  EKHYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN 117
             H  DT+KG  YI D+  ++ + +  P     L+  G  F R+E     QRPFGGQS +
Sbjct: 68  RWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGMPFSRTEQGRIYQRPFGGQSKD 127

Query: 118 --------RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKK 169
                   RTC + DRTGH ++  L +  N       L +  A+ L+ ++   +G  +  
Sbjct: 128 YGKGGQAARTCAASDRTGHALLHTLYQG-NLKAGTTFLNEYYAVDLVKNQ---DGAFV-- 181

Query: 170 CFGAVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDM 229
             G + + +  G+   + AK+T+LATGGAG+IY  T+N     GDG  +A R GV + D+
Sbjct: 182 --GVIAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDI 239

Query: 230 EMVQFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNE 289
           EM QFHPTG+ G G+LVTE  RGEGG L NK+ ERFM+ Y     +L+ RDVVA+++  E
Sbjct: 240 EMWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKE 299

Query: 290 IQEGRGIDGG---VYLDVTHLEPEVIKEKLETMFSQFK-LVGVDIRKEPMKVAPTAHHFM 345
           I  G G       V L + HL  EV+  +L  +    K    VD    P+ V PT H+ M
Sbjct: 300 IIAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMM 359

Query: 346 GGIKIN----------EDCETNISGLFACGEVA-GGLHGANRLGGNALAETQVFGSIAGR 394
           GG+  N          E  +  I GLFA GEVA   +HGANRLGGN+L +  VFG  AG 
Sbjct: 360 GGVATNIHGQAITQNAEGVDEIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGL 419

Query: 395 NALNYAEEKIDISKVYD-SVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRD 453
           +      + I+     D ++E  + +L +       G +V +L  EL+N M ++  + R 
Sbjct: 420 HLEKALSDGIEYDDATDANIEAALARL-SALNERTEGEDVATLRRELQNCMQNYFGVFRT 478

Query: 454 ENGLKTALEKINEIAGK--KVLINGVVDF-----SKKLELENMVLVSKIVINSALLRKES 506
              ++  + ++ ++  +   V IN           + LEL+N++ V++    +A +RKES
Sbjct: 479 GEYMQKGIAQLAQLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKES 538

Query: 507 RGAHFRNDYPKTNEE 521
           RGAH R D+   ++E
Sbjct: 539 RGAHAREDFEDRDDE 553