Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 613 a.a., succinate dehydrogenase flavoprotein subunit from Sinorhizobium meliloti 1021

 Score =  270 bits (690), Expect = 1e-76
 Identities = 182/545 (33%), Positives = 277/545 (50%), Gaps = 41/545 (7%)

Query: 4   DVLIIGGGGAAARAAIECGQKNVVIAS-KGLFGKSGCTVMAEGGYNAVLNEK--DSFEKH 60
           DV+++G GGA  RA +   ++ +  A    +F     TV A+GG  A L     DS++ H
Sbjct: 22  DVVVVGAGGAGLRATLGMAEQGLRTACITKVFPTRSHTVAAQGGIAASLQNMTPDSWQWH 81

Query: 61  YSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN--- 117
             DT+KG  ++ D   +  L   AP     LE +G  F R+   +  QRPFGG   N   
Sbjct: 82  LYDTVKGSDWLGDVDAMQYLAMEAPKAVYELEHYGVPFSRNAEGKIYQRPFGGHMQNYGE 141

Query: 118 -----RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFG 172
                RTC + DRTGH ++  L     +    +   +  AI LI+ +   +G+    C G
Sbjct: 142 GPPVQRTCAAADRTGHAILHTLYGQSLR-NNAEFFIEYFAIDLIMSD---DGR----CTG 193

Query: 173 AVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMV 232
            V  +L +G I+   AK  +LATGG G+ Y   ++     GDG  +  R G+ L DME V
Sbjct: 194 VVAWNLDDGTIHRFAAKMVVLATGGYGRAYFSATSAHTCTGDGGGMIARAGLPLQDMEFV 253

Query: 233 QFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNEIQE 292
           QFHPTG+ G G L+TE  RGEGG L N   ERFM+ Y     +L++RDVV++ +  EI+E
Sbjct: 254 QFHPTGIYGAGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASRDVVSRCMTMEIRE 313

Query: 293 GRGIDGG---VYLDVTHLEPEVIKEKLETMFSQFKL-VGVDIRKEPMKVAPTAHHFMGGI 348
           GRG+      ++L + HL+P V+ E+L  +    K+  GVD+ +EP+ V PT H+ MGG+
Sbjct: 314 GRGVGKNKDHIFLHLDHLDPAVLHERLPGISESAKIFAGVDVTREPIPVLPTVHYNMGGV 373

Query: 349 KIN----------EDCETNISGLFACGEV-AGGLHGANRLGGNALAETQVFGSIAGRNAL 397
             N          ++ E    GL A GE     +HGANRLG N+L +  VFG  A   A 
Sbjct: 374 PTNYWGEVLNADSQNPERIAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAIRAG 433

Query: 398 NYAEEKIDISKVYDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRDENGL 457
              +    + +V  +    I +  +  + +N       L D+++  M +  ++ R +  L
Sbjct: 434 QIIDRNEAVPEVNTAACDRIMERFDRLRHANGTTPTAVLRDKMQRAMQEDAAVFRTQESL 493

Query: 458 KTALEKIN----EIAGKKVLINGVV---DFSKKLELENMVLVSKIVINSALLRKESRGAH 510
           ++   +++    E+   +V    ++   D  + LELEN++  +   +  A  RKESRGAH
Sbjct: 494 ESGCRRLSAIWKELPDVRVTDRSMIWNSDLVETLELENLMANAITTVYGAEARKESRGAH 553

Query: 511 FRNDY 515
            R DY
Sbjct: 554 AREDY 558