Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 594 a.a., Succinate dehydrogenase flavoprotein subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  268 bits (684), Expect = 6e-76
 Identities = 181/553 (32%), Positives = 279/553 (50%), Gaps = 47/553 (8%)

Query: 4   DVLIIGGGGAAARAA---IECGQKNVVIASKGLFGKSGCTVMAEGGYNAVLNE--KDSFE 58
           D L++G GGA  RA    +E G K   I    +F     TV A+GG  A L    +D+++
Sbjct: 12  DALVVGAGGAGLRATFGLVEQGLKTACITK--VFPTRSHTVAAQGGIGAALGNMAEDNWK 69

Query: 59  KHYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN- 117
            H  DT+KG  ++ D+  ++ + + A      LE +G  F R+E     QRPFGG   N 
Sbjct: 70  WHMYDTVKGADWLGDQDAIEYMCREAIPAVYELEHYGVPFSRTEDGRIYQRPFGGHMRNF 129

Query: 118 ------RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCF 171
                 R C + DRTGH ++  L +   +F   +   +  A+ LI+++          C 
Sbjct: 130 GEAPVQRACAAADRTGHAILQTLYQQSLRFNA-EFFVEYFALDLIIED--------GVCR 180

Query: 172 GAVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEM 231
           G +   + +G I+   + +T+LATGG G+ Y   ++     GDG  +  R G+ L DME 
Sbjct: 181 GVIAWCMEDGTIHRFKSHTTVLATGGYGRAYFSCTSAHTCTGDGNGMVARAGLPLQDMEF 240

Query: 232 VQFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNEIQ 291
           VQFHPTG+ G G L+TE  RGEGG L N   ERFM+ Y     +L++RDVV++A+  EI+
Sbjct: 241 VQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPTAKDLASRDVVSRAMTVEIR 300

Query: 292 EGRGI---DGGVYLDVTHLEPEVIKEKLETMFSQFKLV-GVDIRKEPMKVAPTAHHFMGG 347
           EGRG+      + L + HL PEV+  +L  +    K+  GVD  ++P+ V PT H+ MGG
Sbjct: 301 EGRGVGPKKDHINLHLEHLGPEVLHSRLPGITETAKVFSGVDATRDPIPVLPTVHYNMGG 360

Query: 348 IKIN----------EDCETNISGLFACGEVA-GGLHGANRLGGNALAETQVFGSIAGRNA 396
           I  N           D E    GL A GE A   +HGANRLG N+L +  VFG  A   A
Sbjct: 361 IPTNYHGEVLNPTKADPEAIFPGLMAVGECACVSVHGANRLGTNSLLDIVVFGRAAALRA 420

Query: 397 LNYAEEKIDISKV-YDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRDEN 455
               +  I    +  D+ +  + +L +  + +        + D+L+  M    ++ R   
Sbjct: 421 AEVVKPGIAHKPLKADAADLALSRL-DRLRSAKGAKLTAEIRDDLQQAMQRDAAVFRTTK 479

Query: 456 GLKTALEKINEIAGKKVLINGV-------VDFSKKLELENMVLVSKIVINSALLRKESRG 508
            L   + +++++A     I  V        D ++ LELEN++  ++  I+ A  R+ESRG
Sbjct: 480 SLAEGVARVDQVAASLADIKLVDTSMIFNTDLAEALELENLMACAQTTIHGAAARQESRG 539

Query: 509 AHFRNDYPKTNEE 521
           AH   D+P  +++
Sbjct: 540 AHAHEDFPDRDDK 552