Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 599 a.a., fumarate reductase (quinol) flavoprotein subunit from Rahnella sp. WP5

 Score =  312 bits (799), Expect = 3e-89
 Identities = 204/565 (36%), Positives = 308/565 (54%), Gaps = 51/565 (9%)

Query: 4   DVLIIGGGGAAARAAIECGQKN----VVIASKGLFGKSGCTVMAEGGYNAVLNEKDSFEK 59
           D+ IIG GGA  RAAI   + N    + + SK ++     TV AEGG  AV  + DSF+ 
Sbjct: 7   DIAIIGAGGAGLRAAIAAAEANPNLNIALISK-VYPMRSHTVAAEGGSAAVTQDHDSFDF 65

Query: 60  HYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFNRT 119
           H+ DT+ GG ++ ++ +VD  V   P E   LE +GC + R +      R FGG    RT
Sbjct: 66  HFQDTVSGGDWLCEQDVVDHFVHQCPTEMAQLELWGCPWSRKDDGSVNVRRFGGMKIERT 125

Query: 120 CYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFGAVFLDLL 179
            ++ D+TG  M+  L +   K+ +IK  ++   + ++VDE +  G         V ++++
Sbjct: 126 WFAADKTGFHMLHTLFQTSLKYPQIKRFDEHFVLDILVDEGQVRG--------VVAINMM 177

Query: 180 NGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMVQFHPTGM 239
            G    + A + ++ATGGAG++Y   +N     GDG  +A+R G+ L DME VQ+HPTG+
Sbjct: 178 EGTRVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFRHGIPLRDMEFVQYHPTGL 237

Query: 240 LGTGILVTEAVRGEGGILYNKNKERFMKNY-----------DSKRMELSTRDVVAKAIYN 288
            G+GIL+TE  RGEGGIL NK+  R++++Y            +K MEL  RD V++A ++
Sbjct: 238 PGSGILMTEGCRGEGGILVNKDGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWH 297

Query: 289 EIQEGRGID----GGVYLDVTHLEPEVIKEKLETMFSQFK-LVGVDIRKEPMKVAPTAHH 343
           E + GR I+      VYLD+ HL  + ++E+L  +    K  VGVD   +P+ V PTAH+
Sbjct: 298 EWRAGRTIETPRGDVVYLDLRHLGEKKLRERLPFICELAKAYVGVDPITDPIPVRPTAHY 357

Query: 344 FMGGIKINEDCETNISGLFACGEVAG-GLHGANRLGGNALAETQVFGSIAGRNALNYAEE 402
            MGGI+ +  CET I GLFA GE +  GLHGANRLG N+LAE  VFG +AG  A   A E
Sbjct: 358 TMGGIETDAQCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRMAGEKAAERAVE 417

Query: 403 KIDISKVYDSVEKYIEKLKNTFKG--SNSGNNVYSLI-DELKNTMWDFVSISRDENGLKT 459
             D      ++E  +  ++N      +  G+  ++ I DE+   M +   I R    ++ 
Sbjct: 418 AKDTGN-NAALEAQVRDIENRVAALMAQEGDESWAAIRDEMGLAMEEGCGIYRTTELMQK 476

Query: 460 ALEKINEIAG--KKVLINGV-----VDFSKKLELENMVLVSKIVINSALLRKESRGAHFR 512
            ++K+ E+    K+V I         D    +EL + + V++ + +SA+ R+ESRGAH R
Sbjct: 477 TIDKLAELKERFKRVKIQDTSSVFNTDLLYTIELGHGLEVAECMAHSAINRRESRGAHQR 536

Query: 513 NDYPKTNEECTGNFVAVDGKINFVK 537
            D     E CT         +NF+K
Sbjct: 537 LD-----EGCTER-----DDVNFLK 551