Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 668 a.a., fumarate reductase flavoprotein subunit (RefSeq) from Shewanella loihica PV-4

 Score =  244 bits (622), Expect = 1e-68
 Identities = 182/568 (32%), Positives = 289/568 (50%), Gaps = 63/568 (11%)

Query: 3   TDVLIIGGGGAAARAAIECGQKNVVIASKGLF-GKSGCTVMAEGGYNAVLNEK-----DS 56
           TD L++G G A  R AI   ++ +      L   K   +  A+GG  A L        D 
Sbjct: 6   TDSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNTVKGMGDD 65

Query: 57  FEKHYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRS--------------- 101
            + H+ DT+KG  +  D+++  +    AP   + L  +G  + R                
Sbjct: 66  EDVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWTRVTKGPRQVVVNAEKVT 125

Query: 102 -ESAEFAQ-----RPFGGQSFNRTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKL 155
            E AE A      R FGG    RTCY+ D TGH ++  +       + I + E   A+ L
Sbjct: 126 IEEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAVDNKAISLD-IPVHERVEALAL 184

Query: 156 IVDEVEENGKKLKKCFGAVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDG 215
           I D         K+C G V   L+ G++    AKST +ATGG G+IY +++N     G G
Sbjct: 185 IHDG--------KRCHGVVARCLITGELRAYVAKSTTIATGGYGRIYEVSTNAIICEGIG 236

Query: 216 FAIAYREGVE-LVDMEMVQFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRM 274
            A+A   GV  L +ME VQFHPT ++  GIL TE  RG+GG+L +K+  RFM +Y+ ++ 
Sbjct: 237 QALALETGVATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGHRFMPDYEPEKK 296

Query: 275 ELSTRDVVAKAIYNEIQEGRGIDG----GVYLDVTHLEPEVIKEKLETMFSQFK-----L 325
           EL++RDVV++ +   +++G+G+D      ++LD+T L     ++ +ET   + K      
Sbjct: 297 ELASRDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLG----RKHVETNLREVKEICENF 352

Query: 326 VGVDIRKEPMKVAPTAHHFMGGIKINEDCET-NISGLFACGEVA-GGLHGANRLGGNALA 383
           +G+D  ++ + V PT H+ MGGI+ +   ++  + GLF+ GE A   +HG NRLGGN+LA
Sbjct: 353 LGIDPAEDWIPVRPTQHYSMGGIRTDAKGQSPQLKGLFSVGEAACWDMHGFNRLGGNSLA 412

Query: 384 ETQVFGSIAGRNALNYAEE---KIDISKVYDSVEKYIEKLKNTFKGSNSGNNVYSLIDEL 440
           ET V G I G+   ++ EE   +ID S     V +  +++    +G  S  + Y L  E+
Sbjct: 413 ETVVGGMIIGKYVADFCEENTLEIDTSLAERFVAQVRDEIDGLVEGQGS-ESAYELKREM 471

Query: 441 KNTMWDFVSISRDENGLKTALEKINEIAGKKVLI-------NGVVDFSKKLELENMVLVS 493
           +  M D+V I R+   L  A+E++  +  +   +       +   +  + L ++ M+ V+
Sbjct: 472 QRIMMDYVGIFRNGPELSKAVEELEALLIRSRNLGLKCKKRHANPELVEALRVKRMLKVA 531

Query: 494 KIVINSALLRKESRGAHFRNDYPKTNEE 521
             V   A  R ESRGAH R DYP+ N++
Sbjct: 532 LTVACGAEARTESRGAHAREDYPQRNDK 559