Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 668 a.a., fumarate reductase flavoprotein subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  236 bits (603), Expect = 2e-66
 Identities = 178/562 (31%), Positives = 284/562 (50%), Gaps = 53/562 (9%)

Query: 3   TDVLIIGGGGAAARAAIECGQKNVVIASKGLF-GKSGCTVMAEGGY-----NAVLNEKDS 56
           TD L++G G A  R AI   ++ +      L   K   +  A+GG      NAV    D 
Sbjct: 6   TDSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNAVKGMGDD 65

Query: 57  FEKHYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRS--------------- 101
            + H+ DT+KG  +  D+++  +    AP   + L  +G  + R                
Sbjct: 66  EDVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWSRVSAGPREVIVNAQKVT 125

Query: 102 -ESAEFAQ-----RPFGGQSFNRTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKL 155
            + AE A      R FGG    RTCY+ D TGH ++  +       + I + E   A+ L
Sbjct: 126 LQEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAISMD-IPVHERVEALAL 184

Query: 156 IVDEVEENGKKLKKCFGAVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDG 215
           I D         ++C G V   L++G++    AKST +ATGG G+IY +++N     G G
Sbjct: 185 IHDG--------ERCHGVVARCLISGELRAYVAKSTTIATGGYGRIYEVSTNAIICEGIG 236

Query: 216 FAIAYREGVE-LVDMEMVQFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRM 274
            A+A   GV  L +ME VQFHPT ++  GIL TE  RG+GG+L +K+  RFM +Y+ ++ 
Sbjct: 237 QALALETGVATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDYEPEKK 296

Query: 275 ELSTRDVVAKAIYNEIQEGRGIDG----GVYLDVTHLEPEVIKEKL-ETMFSQFKLVGVD 329
           EL++RDVV++ +   +++G+G+D      ++LD+T L  + I+  L E        +G+D
Sbjct: 297 ELASRDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIETNLREVQEICENFLGID 356

Query: 330 IRKEPMKVAPTAHHFMGGIKINEDCET-NISGLFACGEVA-GGLHGANRLGGNALAETQV 387
             K+ + V PT H+ MGGI+     E+  + GLF+ GE A   +HG NRLGGN+LAET V
Sbjct: 357 PAKDWIPVRPTQHYSMGGIRTKATGESPQLKGLFSVGEAACWDMHGFNRLGGNSLAETVV 416

Query: 388 FGSIAGRNALNYAE-EKIDI-SKVYDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMW 445
            G I G+   ++ E   ++I + + +   + ++   +T    +   + + L   ++  M 
Sbjct: 417 GGMIIGKYIADFCENNSLEINTTLAEQFMRQVQTEIDTLVDGDGHESPFELKHAMQRIMM 476

Query: 446 DFVSISRD-------ENGLKTALEKINEIAGKKVLINGVVDFSKKLELENMVLVSKIVIN 498
           D+V I R+          LK  LE+  ++  K    +   +  + L ++ M+ V+  V  
Sbjct: 477 DYVGIFRNGPELDKAVTELKALLERSRKLGIKCKKRHANPELVEALRVKRMLKVALTVAC 536

Query: 499 SALLRKESRGAHFRNDYPKTNE 520
            A  R ESRGAH R DYP+ N+
Sbjct: 537 GAAARTESRGAHAREDYPQRND 558