Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 612 a.a., fumarate reductase, flavoprotein subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  246 bits (627), Expect = 2e-69
 Identities = 182/563 (32%), Positives = 297/563 (52%), Gaps = 54/563 (9%)

Query: 3   TDVLIIGGGGAAARAAIE-CGQKNVVIASKGLFGKSGCTVMAEGGY-----NAVLNEKDS 56
           TD+L IG G A  R AIE  G  + V+    +  +   +V A+GG      NA++ + DS
Sbjct: 6   TDLLCIGAGLAGERCAIEVAGAGHSVVCISLVPARRSHSVAAQGGMQAALGNAIMGDGDS 65

Query: 57  FEKHYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDR---------------- 100
            + H++DT+KG  +  D+++  + V+ AP E + L  +G  ++R                
Sbjct: 66  PDVHFADTVKGSDWGADQEVARMFVEAAPIEMRRLAHWGVPWNRVVAGTHTYWKGGKPFE 125

Query: 101 -SESAE----FAQRPFGGQSFNRTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKL 155
            +E  E       R FGG +  RTCY+ D  GH ++  +     +   + + + + A+ L
Sbjct: 126 ATEKTENHGLIHSRAFGGTAKWRTCYASDGAGHAVLYTMDNRAAQLG-VTVHDRSEAVSL 184

Query: 156 IVDEVEENGKKLKKCFGAVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDG 215
           I D           CFGAV   L  G +    A++T++A+GG G+IY  ++N     G G
Sbjct: 185 IHDG--------HTCFGAVVRCLRTGALRAYLARATLIASGGYGRIYRASTNAIICEGTG 236

Query: 216 FAIAYREGV-ELVDMEMVQFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRM 274
            +IA   GV  L +ME VQFHPTG + T ILVTE  RG+GG L ++ + RFM +Y+  + 
Sbjct: 237 LSIALDTGVVPLGNMEAVQFHPTGTVPTDILVTEGCRGDGGTLLDREEYRFMPDYEPDKA 296

Query: 275 ELSTRDVVAKAIYNEIQEGRGIDG----GVYLDVTHLEPEVIKEKLETMFSQFK-LVGVD 329
           EL++RDVV++ +   +++G G++G     ++LD+ HL    I+ KL  +    +  +G+D
Sbjct: 297 ELASRDVVSRRMIEHMRKGLGVEGPYGEHLWLDIRHLGEAHIRTKLREVDEICQNFLGID 356

Query: 330 IRKEPMKVAPTAHHFMGGIKINE-DCETNISGLFACGEVA-GGLHGANRLGGNALAETQV 387
              + + V PT H+ MGG++ ++      ++GLF+ GE A   LHG NRLGGN+LAET V
Sbjct: 357 PLYQLIPVRPTQHYSMGGVRTDKTGAAYGLAGLFSAGESACWDLHGFNRLGGNSLAETVV 416

Query: 388 FGSIAGRNA---LNYAEEKIDISKVYDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTM 444
            G I GRN    L+  +     + V +++++  E++     GS+   +VY++ + + + +
Sbjct: 417 AGGIVGRNIAAFLDGYDVSFPTAPVREALKRAEERVVRLIAGSDGKESVYAVREAMYDVL 476

Query: 445 WDFVSISRDENGLK---TALEKINEIA---GKKVLINGV-VDFSKKLELENMVLVSKIVI 497
                + R+   L      LE + E A   G K   +G   + +  L L  MV +++ V 
Sbjct: 477 EKAAYVFRNGTDLAWGVRELEALQERAAHIGLKSSGSGANAELALALRLPGMVRLAQCVC 536

Query: 498 NSALLRKESRGAHFRNDYPKTNE 520
           + AL R ESRG+H R DYP+ N+
Sbjct: 537 HGALERTESRGSHCREDYPERND 559