Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 668 a.a., fumarate reductase flavoprotein subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  238 bits (608), Expect = 4e-67
 Identities = 178/563 (31%), Positives = 284/563 (50%), Gaps = 55/563 (9%)

Query: 3   TDVLIIGGGGAAARAAIECGQKNVVIASKGLF-GKSGCTVMAEGGY-----NAVLNEKDS 56
           TD L++G G A  R AI   ++ +      L   K   +  A+GG      NAV    D 
Sbjct: 6   TDSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNAVKGMGDD 65

Query: 57  FEKHYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRS--------------- 101
            + H+ DT+KG  +  D+++  +    AP   + L  +G  + R                
Sbjct: 66  EDVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWTRVTAGPRDVIVNAQKVT 125

Query: 102 -ESAEFAQ-----RPFGGQSFNRTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKL 155
            + AE A      R FGG    RTCY+ D TGH ++  +       + I + E   A+ +
Sbjct: 126 LQEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAISMD-IPVHERVEALSI 184

Query: 156 IVDEVEENGKKLKKCFGAVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDG 215
           I D         ++C G +   L+ G++    AKST +ATGG G+IY +++N     G G
Sbjct: 185 IHDG--------QRCHGVIARCLITGELRAYVAKSTTIATGGYGRIYEVSTNAIICEGIG 236

Query: 216 FAIAYREGVE-LVDMEMVQFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRM 274
            A+A   GV  L +ME VQFHPT ++  GIL TE  RG+GG+L +K+  RFM +Y+ ++ 
Sbjct: 237 QALALETGVATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDYEPEKK 296

Query: 275 ELSTRDVVAKAIYNEIQEGRGIDG----GVYLDVTHLEPEVIKEKL-ETMFSQFKLVGVD 329
           EL++RDVV++ +   +++G+G+D      ++LD+T L  + I+  L E        +G+D
Sbjct: 297 ELASRDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIETNLREVQEICENFLGID 356

Query: 330 IRKEPMKVAPTAHHFMGGIKINEDCET-NISGLFACGEVA-GGLHGANRLGGNALAETQV 387
             K+ + V PT H+ MGGI+     E+  + GLF+ GE A   +HG NRLGGN+LAET V
Sbjct: 357 PAKDWIPVRPTQHYSMGGIRTKATGESPQLKGLFSVGEAACWDMHGFNRLGGNSLAETVV 416

Query: 388 FGSIAGRNALNYAEE---KIDISKVYDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTM 444
            G I G+   ++ E    +ID +++ +   + ++   +T        + + L  E++  M
Sbjct: 417 GGMIIGKYVADFCENNSLEID-TQLAEKFMRQVQTEIDTLVDGEGHESPFELKREMQRIM 475

Query: 445 WDFVSISRD-------ENGLKTALEKINEIAGKKVLINGVVDFSKKLELENMVLVSKIVI 497
            D+V I R+          LK  LE+  ++  K    +   +  + L ++ M+ V+  V 
Sbjct: 476 MDYVGIFRNGPELDKAVTELKALLERSRKLGVKCKKRHANPELVEALRVKRMLKVALTVA 535

Query: 498 NSALLRKESRGAHFRNDYPKTNE 520
             A  R ESRGAH R DYP+ N+
Sbjct: 536 CGAAARTESRGAHAREDYPQRND 558