Pairwise Alignments

Query, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 557 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases from Pseudomonas fluorescens FW300-N2E2

 Score =  238 bits (608), Expect = 4e-67
 Identities = 166/528 (31%), Positives = 259/528 (49%), Gaps = 17/528 (3%)

Query: 30  ENFNFAYDIVDEYAKIAPEKIAIIWCDDNNDEKIFTFKDMKKYSDKAANFFLKHGIKKGD 89
           E  N   +  D +A   P +IA+ W   +  +  +T++D++  + + ANF    G+ KGD
Sbjct: 29  EALNACVECCDRHA--LPGRIALFWEGRDGSDATWTYRDLQDNAARFANFLRAQGVGKGD 86

Query: 90  TVMLTLKSRYEFWFCMLGLHKIGAVAIPATHMLTTKDIVYRIEKAGLKMIVCIGENGVPD 149
            V   L    E    +L   +IGAV  P       K I +R+  +G +++V    N    
Sbjct: 87  KVAGLLPRTAELLIVVLATWRIGAVYQPLFTAFGPKAIEHRVGSSGARIVVTDAVNR--- 143

Query: 150 YVDEAVSEINSDVLKACVSNLNNDSWIDFSKELEESSEDFTRPVGEMDTKNDDVLVAYFS 209
                ++EI        V        +           + +     +    +D  +  F+
Sbjct: 144 ---PKLNEIAGCPTIVTVGGEKGQGIVRGDYSFWAEVANHSSQCEPLMLTGEDPFLLMFT 200

Query: 210 SGTTGYPKLIQHDHEYPLGHITTAKYWQNVEDDGLHYTVADSGWAKCIRGKLYGQWIAGT 269
           SGTTG  K +    +  +   +  +   ++  +   + VAD GWA  I   + G    G 
Sbjct: 201 SGTTGPAKALSVPLKAIVAFQSYTRDAVDLRPEDAFWNVADPGWAYGIYFGVTGPLAMGH 260

Query: 270 AVFVYDYDRFDAGNMLEKIAKYKITTFCAPPTIYRFMIK--QDISKADFSSLHYAVTAGE 327
            +  YD   F   +    I KY IT     PT YR +I   +  +++    L    +AGE
Sbjct: 261 PITFYD-GPFTLESTCRVINKYGITNLTGSPTAYRLLIAGGEQFARSIKGKLRIVSSAGE 319

Query: 328 PLNPEVYNKFLEFTGLRLMEGFGQTETVVSVANFTWMDPKP--GSMGKPVPIFDLMIKGP 385
           PLNPEV   F +   + + + +GQTE  + + N   ++     G+ G   P   +++   
Sbjct: 320 PLNPEVIRWFADNLNVVIHDHYGQTELGMVLCNHHGLEHPVHLGAAGFASPGHRIVVLDE 379

Query: 386 DGKECDVGEEGELAFKTEDGKPLGLFSGYFKDPERTKKAWYDGYYHTGDTAWKDEDGYLW 445
           + +E  VG+ G LA       P+  F+GY   P    KA+   YY +GDT   + DG + 
Sbjct: 380 NQRELGVGQPGILAVDRSQS-PMCWFAGYEGAPT---KAFVGDYYLSGDTVELNLDGSIS 435

Query: 446 FVGRNDDLIKSSGYRIGPFEVESALISHPAVLECAITGVPDPVRGQIVKATIVLTSEYEA 505
           FVGR+DD+I +SGYR+GPF+VESALI HPAV+E A+ G PDP R ++VKA +VL+++Y A
Sbjct: 436 FVGRSDDVITTSGYRVGPFDVESALIEHPAVVEAAVIGKPDPERTELVKAFVVLSTQYRA 495

Query: 506 SEELKKELQDHVKHNTAPYKYPRAIEFVKELPKTISGKIRRVEIRETD 553
           S EL +EL+ HV+   A + YPR IEFV +LPKT SGK++R  +R  +
Sbjct: 496 SPELAEELRLHVRKRLAAHAYPREIEFVSDLPKTPSGKLQRFILRNQE 543