Pairwise Alignments

Query, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 585 a.a., Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases from Pseudomonas stutzeri RCH2

 Score =  231 bits (589), Expect = 6e-65
 Identities = 171/549 (31%), Positives = 263/549 (47%), Gaps = 66/549 (12%)

Query: 33  NFAYDIVDEYAKIAPEK--IAIIWCDDNNDEKIFTFKDMKKYSDKAANFFLKHGIKKGDT 90
           N A++ VD +A   P     A+ + + N   +  ++  +K+ +++ AN   + G+ +G+ 
Sbjct: 47  NLAHEAVDRHAA-GPRAGYCALRFLERNGSRRELSYLQLKRQTNRFANVLAQLGVARGER 105

Query: 91  VMLTLKSRYEFWFCMLGLHKIGAVAIPA-----------------THMLTTKDIVYRIEK 133
           + +      E +  +LG  K G V  P                    +L T +++YR + 
Sbjct: 106 LFVLCNRGVELYLGVLGGLKNGCVVSPLFAAFGPEPLETRLRLGDCSVLLTSEMLYRKKV 165

Query: 134 AGL-------KMIVCIGENGVPDYVDEAVSEINSDVLKACVSNLNNDSWIDFSKELEESS 186
           A L       K ++   E+G                      + + D  +D    L  + 
Sbjct: 166 ARLRDRLPLLKHVLLYDESG---------------------GHTSIDGTLDLHDLLAAAG 204

Query: 187 EDFTRPVGEMDTKNDDVLVAYFSSGTTGYPKLIQHDHEYPLGHITTAKYWQNVEDDGLHY 246
           E+F        T  D   + +F+SGTTG PK   H H   L H  T +Y  ++  D +++
Sbjct: 205 EEFKIA----PTTADSPSLLHFTSGTTGTPKGALHVHGAALTHYVTGRYALDLHPDDIYW 260

Query: 247 TVADSGWAKCIRGKLYGQWIAGTAVFVYDYDRFDAGNMLEKIAKYKITTFCAPPTIYRFM 306
             AD GW       +    + G    V D   FDA      + K +I+ +   PT  R +
Sbjct: 261 CSADPGWVTGTSYGILAPLLLGVTSVV-DCGEFDAERWYGILEKERISVWYTAPTAIRML 319

Query: 307 IKQ--DISKADFS-SLHYAVTAGEPLNPEVYNKFLEFTGLRLMEGFGQTETV-VSVANFT 362
           +K   ++++  F   L +  + GEPLNPE      E  GL + + + QTET  + +AN  
Sbjct: 320 MKAGPELARRHFHPQLRFVASVGEPLNPEAVWWGKEVLGLPIHDNWWQTETGGIMIANIP 379

Query: 363 WMDPKPGSMGKPVPIFDLMI--KGPDGKECDVGEE--GELAFKTEDGKPL-GLFSGYFKD 417
            M  KPGSMGKP+P  +  I   G DG    +G++  GELA K    +P  G+F  Y   
Sbjct: 380 AMPIKPGSMGKPLPGVEAAIVRHGEDGNLTFLGDDEIGELALK----QPWPGMFRTYLGQ 435

Query: 418 PERTKKAWYDGYYHTGDTAWKDEDGYLWFVGRNDDLIKSSGYRIGPFEVESALISHPAVL 477
            ER ++ +   +Y +GD A +D DGY WF+GR+DD+IKS+G+ IGPFEVESAL+ H AV 
Sbjct: 436 EERYRRCFAGDWYLSGDLARRDADGYYWFIGRSDDVIKSAGHLIGPFEVESALMEHSAVA 495

Query: 478 ECAITGVPDPVRGQIVKATIVLTSEYEASEELKKELQDHVKHNTAPYKYPRAIEFVKELP 537
           E A+ G PDP+ G+ VKA + L    EASE L  EL  H +        P+ +EF+  LP
Sbjct: 496 EAAVIGKPDPLLGETVKAFVSLKRGREASEALHDELIGHARKRLGAAVAPKELEFLASLP 555

Query: 538 KTISGKIRR 546
           +T SGK+ R
Sbjct: 556 RTRSGKLMR 564