Pairwise Alignments

Query, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 531 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  171 bits (433), Expect = 7e-47
 Identities = 144/506 (28%), Positives = 237/506 (46%), Gaps = 31/506 (6%)

Query: 62  KIFTFKDMKKYSDKAANFFLKHG-IKKGDTVMLTLKSRYEFWFCMLGLHKIGAVAIPATH 120
           K  +F ++ K S   A F   H  ++ GD V + L +  +F     G+ K G V +    
Sbjct: 39  KSHSFNEIDKLSTDFAAFLQHHTQLQPGDKVAIQLPNLTQFVIAAYGVLKAGMVLVNTNP 98

Query: 121 MLTTKDIVYRIEKAGLKMIVCIGENGVPDY--------VDEAVSEINSDVLKACVSNLNN 172
           + T ++++++ + +G K++V + +  +P          ++  +S    D++   +     
Sbjct: 99  LYTERELIHQFKDSGAKVLVVLSDL-LPTLAKVVAETPIELVISTHALDLVSPQIQPKTG 157

Query: 173 DSWIDFSKELEESSEDFTRPVGEMDTKNDDVLVAY-FSSGTTGYPKLIQHDHEYPLGHIT 231
              I+F K L   S++  +PV      N   L A  ++ GTTG  K     H   + +  
Sbjct: 158 LKNIEFLKALNLGSQESWQPVAA----NHSTLAALQYTGGTTGLSKGAMLSHGNLIANAL 213

Query: 232 TAK-YWQNVEDDGLHYTVADSG----WAKCIRGKLYGQWIAGTAVFVYDYDRFDAGNMLE 286
             +    NV   G    VA       +A  +   L+   +   A  V   +  D  ++++
Sbjct: 214 QCRDRLANVITPGEDIFVAPLPIYHIYAFLVNLVLF---VEQGACSVLIPNPRDIPSLIK 270

Query: 287 KIAKYKITTFCAPPTIYRFMIKQDISKA-DFSSLHYAVTAGEPLNPEVYNKFLEFTGLRL 345
            +AKY  T F    T++  +  Q+  +A DFS L   ++ G  L       + + TG  +
Sbjct: 271 TLAKYPFTGFAGLNTLFVALCHQEEFRALDFSHLKLTISGGTALTEAAAGLWQQTTGCTI 330

Query: 346 MEGFGQTETVVSVANFTWMDPKPGSMGKPVPIFDLMIKGPDGKECDVGEEGELAFKTEDG 405
            EG+G +ET   +        + G++G+PV   ++ I   D     +G+ GELA +    
Sbjct: 331 SEGYGLSETSPVITLNQPGAERLGTIGRPVLATEVQILDEDETPVPMGQAGELAVRGPQ- 389

Query: 406 KPLGLFSGYFKDPERTKKAWY-DGYYHTGDTAWKDEDGYLWFVGRNDDLIKSSGYRIGPF 464
               + SGY++    T++ +  DG++ TGD A  + DG    V R  D+I  SG+ + P 
Sbjct: 390 ----VMSGYWQQAGETERVFSKDGFFKTGDIAIAEPDGCYRIVDRKKDMIIVSGFNVYPN 445

Query: 465 EVESALISHPAVLECAITGVPDPVRGQIVKATIVLTSEYEASEELKKELQDHVKHNTAPY 524
           EVE+ L SHPAVLECA+ GV D   G+ VKA IVL    EA ++ +  +  H + N A Y
Sbjct: 446 EVENVLASHPAVLECAVIGVADERSGEAVKAVIVLKPSVEA-DDARAAITAHCQANLAGY 504

Query: 525 KYPRAIEFVKELPKTISGKIRRVEIR 550
           K PR IEFV  LPK+  GKI R  +R
Sbjct: 505 KQPRHIEFVASLPKSTVGKILRRALR 530