Pairwise Alignments

Query, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 508 a.a., long-chain fatty acid--CoA ligase from Rhodopseudomonas palustris CGA009

 Score =  173 bits (439), Expect = 1e-47
 Identities = 148/529 (27%), Positives = 232/529 (43%), Gaps = 42/529 (7%)

Query: 33  NFAY-DIVDEYAKIAPEKIAIIWCDDNNDEKIFTFKDMKKYSDKAANFFLKHGIKKGDTV 91
           +FAY D +  +A++ PE+IA++   D    +  +++ M +  D+ A      G+ +GD V
Sbjct: 2   SFAYFDWIAHHAEVRPERIAVV---DLASSRKISYRAMDERVDRLAAHLAALGVGRGDRV 58

Query: 92  MLTLKSRYEFWFCMLGLHKIGAVAIPATHMLTTKDIVYRIEKAGLKMIVCIGENGVPDYV 151
            +   +  E         ++GA+ +P    LT  ++ Y +  A  +++            
Sbjct: 59  AVLALNAVETLEVQFACFRLGAIFVPLNVRLTVHELSYIVGDAAPRVLAH---------- 108

Query: 152 DEAVSEINSDVLKAC-VSNLNNDSWIDFSKELEESSEDFTRPVGEMDTKNDDVLVAYFSS 210
           D+ ++ +  ++  AC V +L     + F    E +     R         DDV    ++S
Sbjct: 109 DDELAPMAKELKAACSVPHL-----LAFGAAYEAALAASPRLGASEPVTLDDVSTIMYTS 163

Query: 211 GTTGYPKLIQHDHEYPLGHITTAKYWQNVEDDGLHYTVAD---SGWAKCIRGKLYGQWIA 267
           GTTG PK     H     +         +    +   V     +G   C    +      
Sbjct: 164 GTTGKPKGAMITHGMTFINAVNLGIPAFISQRTVFLCVLPLFHTGGLNCYTNPVLHA--G 221

Query: 268 GTAVFVYDYDRFDAGNMLEKIAKYKI--TTFCAPPTIYRFMIKQDISKA-DFSSLHYAVT 324
           GT + +     FD G  L  I    +  T F   P+IY+FM +     A D S L  A  
Sbjct: 222 GTTLLMR---AFDPGAALSIIGDPSVGLTHFFGVPSIYQFMCQHPAFAATDLSRLQIAGV 278

Query: 325 AGEPLNPEVYNKFLEFTGLRLMEGFGQTETVVSVANFTWMDP--KPGSMGKPVPIFDLMI 382
            G P+ P    K  +  G  L++G+G TET  +V      D   K GS GKPV   DL I
Sbjct: 279 GGAPM-PVPLLKIWQERGCALVQGYGMTETSPAVLMLDADDAARKAGSAGKPVLHADLKI 337

Query: 383 KGPDGKECDVGEEGELAFKTEDGKPLGLFSGYFKDPERTKKAWYDGYYHTGDTAWKDEDG 442
            GPDG     GE GEL  K  +  P     GY+  P+  + ++ DG+ HTGD A  D++G
Sbjct: 338 VGPDGDPVKPGEMGELWVKGPNITP-----GYWNRPDANRTSFTDGWLHTGDAARVDDEG 392

Query: 443 YLWFVGRNDDLIKSSGYRIGPFEVESALISHPAVLECAITGVPDPVRGQIVKATIVLTSE 502
           + + V R  D+  S G  + P EVE  L   P + E A+ G PDP  G+   A + L   
Sbjct: 393 FYYIVDRTKDMYISGGENVYPAEVEDVLYQLPEIAEAAVIGAPDPQWGETGVAVVALKPG 452

Query: 503 YEASEELKKELQDHVKHNTAPYKYPRAIEFVKELPKTISGKIRRVEIRE 551
            E SE    +L  H +   A +K P+ + FV+ LP+  +GK+ +  +RE
Sbjct: 453 QELSE---AKLLAHCRERLARFKCPQRVSFVEALPRNATGKVHKPTLRE 498