Pairwise Alignments

Query, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 538 a.a., putative benzoate-CoA ligase from Phaeobacter inhibens DSM 17395

 Score =  226 bits (575), Expect = 2e-63
 Identities = 172/535 (32%), Positives = 257/535 (48%), Gaps = 36/535 (6%)

Query: 27  DVPENFNFAYDIVDEY-AKIAPEKIAIIWCDDNNDEKIFTFKDMKKYSDKAANFFLKH-G 84
           D PE  N A ++ D   AK   +  A+I      + +  T+K++  ++++ A+  ++  G
Sbjct: 31  DYPERLNAAVELTDAMVAKGFGDHTALI-----GNGRRRTYKELTDWTNRLAHVLVEDLG 85

Query: 85  IKKGDTVMLTLKSRYEFWFCMLGLHKIGAVAIPATHMLTTKDIVYRIEKAGLKMIVCIGE 144
           ++ G+ +++   +      C L   K GAV +    ML   ++   I+KA +   +C   
Sbjct: 86  VQPGNRILIRSANNPAMVACWLAATKAGAVVVNTMPMLRAGELAKIIDKAEISHALCDTR 145

Query: 145 NGVPDYVDEAVSEINSDVLKACVSNLNNDSWIDFSKELEESSEDFTRPVGEMDTKNDDVL 204
                 ++E V+   +      V   +  S  +   EL+  + +       + T  DDV 
Sbjct: 146 -----LMEELVACAKTSAHLKSVVGFDGTS--NHDAELDRLALEKPVRFEAVATGRDDVA 198

Query: 205 VAYFSSGTTGYPKLIQHDHEYPLGHITTAKYWQNVEDDGLHYTVADSGWAKCIRGKLYGQ 264
           +  F+SGTTG PK   H H   L  +    Y   V    L  T  D           +G 
Sbjct: 199 LLGFTSGTTGSPKATMHFHRDLL--MIADGYAAEV----LQVTPEDIFVGSPPLAFTFG- 251

Query: 265 WIAGTAVFVYDY-------DRFDAGNMLEKIAKYKITTFCAPPTIYRFMIKQDISKADFS 317
            + G A+F   +       +     N++E I  YK T     PT YR M++     AD S
Sbjct: 252 -LGGLAIFPLRFGAAATLLENASPPNLIEIIETYKATVCFTAPTAYRVMLRAMEEGADLS 310

Query: 318 SLHYAVTAGEPLNPEVYNKFLEFTGLRLMEGFGQTETVVSVANFTWMDPKPGSMGKPVPI 377
           SL  AV+AGE L   VY++++  TG  +++G G TE +    +  + D +P   GKPV  
Sbjct: 311 SLRAAVSAGETLPAPVYDEWIAQTGKPMLDGIGATEMLHIFISNRFDDHRPACTGKPVKG 370

Query: 378 FDLMIKGPDGKECDVGEEGELAFKTEDGKPLGLFSGYFKDPERTKKAWYDGYYHTGDTAW 437
           + + +   DG E   GE G LA K   G        Y  D  + +    DG+  TGD+  
Sbjct: 371 YRVRVLDSDGNEAPRGEVGRLAVKGPTG------CRYLADARQGEYV-KDGWNITGDSFV 423

Query: 438 KDEDGYLWFVGRNDDLIKSSGYRIGPFEVESALISHPAVLECAITGVPDPVRGQIVKATI 497
            D DGYL F  RNDD+I S+GY I   EVE+AL+SH  V ECA+ G  D  RG+IV+A +
Sbjct: 424 MDVDGYLHFAARNDDMIVSAGYNIAGPEVEAALLSHDLVTECAVIGASDDARGEIVQAHV 483

Query: 498 VLTSEYEASEELKKELQDHVKHNTAPYKYPRAIEFVKELPKTISGKIRRVEIRET 552
           VL    +ASE L + LQDHVK   APYKYPR I +   LPKT +GKI+R  ++ T
Sbjct: 484 VLAEGAQASEVLTRALQDHVKAAIAPYKYPRDIVYTDALPKTETGKIQRFRLKST 538