Pairwise Alignments

Query, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 650 a.a., acetyl-CoA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (475), Expect = 1e-51
 Identities = 165/579 (28%), Positives = 267/579 (46%), Gaps = 52/579 (8%)

Query: 9   VKKTEFESYEDFVENFKIDVPENFNFAYDIVDEYAKIAPEKIAIIW-CDDNNDEKIFTFK 67
           VKKT F+ +   +  F        N + + +D +     +K+AIIW  DD  D++  T+ 
Sbjct: 55  VKKTSFDDHNLSINWF---YDGTLNASVNCLDRHLADNADKLAIIWEGDDAADQRTLTYG 111

Query: 68  DMKKYSDKAANFFLKHGIKKGDTVMLTLKSRYEFWFCMLGLHKIGAVAIPATHMLTTKDI 127
           ++     K AN     G+++GD V + +    E    ML   +IGA+        +   I
Sbjct: 112 ELHTEVCKFANALRSQGVRRGDVVTVYMPMVPEAAVVMLACARIGAIHSVVFGGFSPDSI 171

Query: 128 VYRIEKAGLKMIVCIGEN-------GVPDYVDEAVSEINSDVLKACVSNL-------NND 173
             R+     K+++   E         +   +DEA+S  + DV   CV  +       N  
Sbjct: 172 ASRVIDGKSKVVITADEGVRGGRTIPLKANIDEALS--HPDV--TCVEKVIVLERTGNPV 227

Query: 174 SWID-----FSKELEESSEDFTRPVGEMDTKNDDVLVAYFSSGTTGYPKLIQHDHEYPLG 228
           +W++     ++  +E +SE       EM    +D L   ++SG+TG PK + H     L 
Sbjct: 228 NWVEGRDIKWASLMETASEHCVAE--EMGA--EDPLFLLYTSGSTGNPKGVLHTTGGYLV 283

Query: 229 HIT-TAKYWQNVEDDGLHYTVADSGWAKCIRGKLYGQWIAGTAVFVYDY--DRFDAGNML 285
           + + T +Y  + ++  +++  AD GW       +YG    G  + +++   +      + 
Sbjct: 284 YASMTHEYVFDYKEGEIYWCTADVGWITGHSYMVYGPLANGATILIHEGIPNYPTPARLG 343

Query: 286 EKIAKYKITTFCAPPTIYRFMI---KQDISKADFSSLHYAVTAGEPLNPEVYNKFLEFTG 342
           E I ++K+      PT+ R ++   K+     D SSL    + GEP+NPE +  + E  G
Sbjct: 344 EMIDRHKVNILYTAPTLIRALMAEGKEQFDGFDGSSLRIMGSVGEPINPEAWRWYHEVIG 403

Query: 343 LR---LMEGFGQTET----VVSVANFTWMDPKPGSMGKPVPIFDLMIKGPDGKECDVGEE 395
                +++ + QTET    +  +   T  D KPGS  +P       +    G   D   E
Sbjct: 404 HENCPIVDTWWQTETGGILISPLPGAT--DTKPGSATRPFFGVQPALVDNMGNIIDGAAE 461

Query: 396 GELAFKTEDGKPLGLFSGYFKDPERTKKAWYD---GYYHTGDTAWKDEDGYLWFVGRNDD 452
           G L     D  P G     + D +R    ++    G Y TGD A +DEDGY W  GR DD
Sbjct: 462 GNLVIL--DSWP-GQMRTVYGDHDRFALTYFKTFRGMYFTGDGARRDEDGYYWITGRVDD 518

Query: 453 LIKSSGYRIGPFEVESALISHPAVLECAITGVPDPVRGQIVKATIVLTSEYEASEELKKE 512
           +I  SG+R+G  EVESAL++H  V E A+ G P  ++GQ + A + LT   + SEEL++E
Sbjct: 519 VINVSGHRLGTAEVESALVAHEHVAEAAVVGYPHDIKGQGIYAYVTLTKGTQESEELRQE 578

Query: 513 LQDHVKHNTAPYKYPRAIEFVKELPKTISGKIRRVEIRE 551
           L+  V+        P  I++   LPKT SGKI R  +R+
Sbjct: 579 LRQWVRKEIGALATPDLIQWAGGLPKTRSGKIMRRFLRK 617