Pairwise Alignments

Query, 351 a.a., 3-methyl-2-oxobutanoate dehydrogenase subunit VorB from Methanococcus maripaludis S2

Subject, 578 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis JJ

 Score = 55.5 bits (132), Expect = 4e-12
 Identities = 82/342 (23%), Positives = 142/342 (41%), Gaps = 42/342 (12%)

Query: 4   QLVKGNTAVIIGAMYAGCDCYFGYPITPASEVLHEASKYFPMVGRKFVQAESEEAAINMV 63
           +L+ GN AV  GA  AG      YP TP++E+     KY P +  ++  + +E+ A+ + 
Sbjct: 3   KLMLGNEAVARGAYEAGVLVATAYPGTPSTEITEHIVKY-PEINSEW--SVNEKVALEVA 59

Query: 64  YGAASTGKRVLCATSGPGMSLKQEGISFLAGSELPCVLVNVQRAGPGLGNIGPEQADYNQ 123
            G+A  G R + +    G+++  + +  +A + +   L+ +    P + +   EQ     
Sbjct: 60  IGSAIAGARTVVSMKHVGLNVAADPLMTVAYTGINAGLLIIVADDPSMHSSQNEQDTRY- 118

Query: 124 AVKGGGHGNYKNI-VLAPNSVQEMCDFTAKAFELSTKYKNPVIV-LSDGV-----LGQMV 176
                 +G +  I VL P+  QE  DF     E+S K+  PVI+ LS  V     L ++ 
Sbjct: 119 ------YGMFAKIPVLEPSDSQECKDFVKLGLEISEKFDTPVILRLSTRVSHSQSLVELE 172

Query: 177 EPLKFPEQAIKPEIDESWAVCGTKETRKNLVTSIFLDFKQLEEFNYKLQDKYEIIKENEQ 236
           E  K   +    + + S  V      +K     IF++ +  E  N+           +  
Sbjct: 173 EKEKIELKLY--DYNPSKYVSAPANAKKR---RIFIEERLNELSNF----------ADSS 217

Query: 237 DFEGYMLDDAEIILVSYGISSRISKTAVDVARKEGLKVGLFRPKTLFPFPE---KELNKI 293
           D       + +I +++ G++   +K AV  A    LK G+      +P PE   KE  + 
Sbjct: 218 DINKIEYTNKKIGIITSGVAYNYAKEAVSDA--SFLKFGM-----SYPLPEEKIKEFVQN 270

Query: 294 AEKKCTFISVEMSNGQMAEDIKLATCCKRPIELVNRLGGNLI 335
            +K   F  +E    Q    I L    K    +V  L   +I
Sbjct: 271 CDKVYVFEELEPIFEQKIRSIGLNVIGKEIFPVVGELSSEII 312