Pairwise Alignments

Query, 351 a.a., 3-methyl-2-oxobutanoate dehydrogenase subunit VorB from Methanococcus maripaludis S2

Subject, 1185 a.a., pyruvate-flavodoxin oxidoreductase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 53.5 bits (127), Expect = 3e-11
 Identities = 76/309 (24%), Positives = 121/309 (39%), Gaps = 42/309 (13%)

Query: 27  YPITPASEVLHEASKYFPMVGRKFV--------QAESEEAAINMVYGAASTGKRVLCATS 78
           YPITP+S +     ++    GRK +        + +SE  A   V+G+   G      T+
Sbjct: 30  YPITPSSTMAEYVDEW-AAAGRKNIFGETVLVQEMQSEGGAAGAVHGSLQAGALTTTYTA 88

Query: 79  GPGMSLKQEGISFLAGSELPCVLVNVQR--AGPGLGNIGPEQADYNQAVKGGGHGNYKNI 136
             G+ L    +  +AG  LPCV     R  A   L   G  Q D   A + G        
Sbjct: 89  SQGLLLMIPNMYKIAGEFLPCVFHVSARTLASHALCIFGDHQ-DVMSARQTGF------A 141

Query: 137 VLAPNSVQEMCDFTAKAFELSTKYKNPVIVLSDGVLG----QMVEPLKFPEQAIKPEIDE 192
           +LA  SVQE+ D    A   + K + P +   DG       Q +E L+  + A  P ID+
Sbjct: 142 MLAEGSVQEVMDLAGVAHLATIKSRVPFMNFFDGFRTSHEIQKIEMLENDDLA--PLIDQ 199

Query: 193 -------SWAVCGTKETRKNLVTSIFLDFKQLEEFNYKLQDKYEIIKENEQD-------- 237
                  + A+   K   + +  +    F+  E  N   +    I++E   +        
Sbjct: 200 EALAEFRARALNPMKPVARGMAENPDHFFQHRESCNNYYEAVPAIVEEYMNEISKITGRK 259

Query: 238 ---FEGYMLDDAEIILVSYGISSRISKTAVDVARKEGLKVGLFRPKTLFPFPEKELNKIA 294
              F+ Y  +DAE ++++ G  +  ++ A+D     G KVG+       PF  K      
Sbjct: 260 YGLFDYYGAEDAERVIIAMGSVTEAAREAIDHLVANGEKVGMVAVHLYRPFSAKHFLAAV 319

Query: 295 EKKCTFISV 303
            K    I+V
Sbjct: 320 PKTAKSIAV 328