Pairwise Alignments

Query, 438 a.a., bifunctional hexulose-6-phosphate synthase/ribonuclease regulator from Methanococcus maripaludis S2

Subject, 171 a.a., ribonuclease E activity regulator RraA from Vibrio cholerae E7946 ATCC 55056

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)

Query: 271 FAGPAVTVRTYSGDWSKPVSAIDNCEAGNVLVIDNCSS--EIACWGGLATLSCKTKGVVA 328
           FAG   T++ Y  D       ++    G +L+ID   S         LA L+ + +    
Sbjct: 32  FAGQITTIKCYE-DNGLIRETLEQDGLGRILLIDGGGSLRRALIDAELAALAEENEWE-G 89

Query: 329 VVIDGAVRDVEEILKIGIPVYARSITPTAGEPKGFGEINAVIECAGRTVEPGDWIVGDEN 388
           +V+ G+VR+V+E+ ++ I + A +  P     +G GE++  +   G T  P D++  D  
Sbjct: 90  IVVYGSVREVDELEEMSIGIQAIASIPVGATSQGIGEVDIPVNFGGVTFLPEDYLYADNT 149

Query: 389 GIIV 392
           GII+
Sbjct: 150 GIII 153