Pairwise Alignments

Query, 631 a.a., Glu-tRNA(Gln) amidotransferase subunit GatE from Methanococcus maripaludis S2

Subject, 504 a.a., aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B from Phaeobacter inhibens DSM 17395

 Score = 66.6 bits (161), Expect = 2e-15
 Identities = 57/234 (24%), Positives = 112/234 (47%), Gaps = 9/234 (3%)

Query: 403 IPEETRKA-LDDGNTSYLRPLPGAA--RMYPETDVPTITITEEKLEFVRNNLPEMPEEKL 459
           I +ETR    D G T  +R    A   R +P+ D+  + I +  ++ +  NLPE+P+EK 
Sbjct: 272 IDQETRLYDPDKGETRSMRSKEEAHDYRYFPDPDLLPLEIEQAWVDDIAANLPELPDEKK 331

Query: 460 VRFVKEYELNEDLAKQMVMSYHVDLF--ETLSKKYSKIKPTLIATTLEATIKEIKREGLD 517
            RF+K++ L++  A  +        F  +T   +  K+    +   L   +K+ + + + 
Sbjct: 332 ARFIKDFGLSDYDASVLTADVESATFFEQTAKGRSGKLAANWVINELFGRLKKDEDKQIT 391

Query: 518 TDLLTEEHLEELFNGLSEDKMSKEAVPDVIKGFIENPTKKLDEILEIKGMSSMS-VEEVE 576
              ++   L  + + +S D +S +   D+ +  +        +I+E +GM  ++    +E
Sbjct: 392 DSPVSPAQLGGIIDLISSDAISGKIAKDLFE-IVYTEGGDPAQIVEERGMKQVTDTGAIE 450

Query: 577 SIIEDIINQNISQVNEKGMG--AMGLLMGRCMAQLRGKADGKLINTTLQKKLKE 628
           + +++II  N +QV +  +     G  +G+ M    GKA+ K +N  + KKL E
Sbjct: 451 AALDEIIAANPAQVEKAKVNPKLAGWFVGQVMKATGGKANPKAVNELVAKKLGE 504



 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 67/289 (23%)

Query: 3   YDYEKLGLKVGLEIHQQLNTKRKLFCNCPTKIRDDEPHGEIERVLRPSQSEMGHVDKAAL 62
           +D+E   L +G+E+H Q+++  KLF    TK    EP+           S +  VD A  
Sbjct: 19  HDWE---LVIGMEVHAQVSSNAKLFSGASTKF-GAEPN-----------SNVAFVDAAM- 62

Query: 63  LESKKEKKFIYQYYNDTTCLVELDDEPPHDVAPEAVDTALEVSTLMNMKMADEVQIMRKM 122
                              L  ++D        +AV T L +   +N+  A +    RK 
Sbjct: 63  ----------------PGMLPVINDY----CVEQAVRTGLGLKADINLWSAFD----RKN 98

Query: 123 VIDGSNTSGFQRTMF---VSQEGFIETEYG-----NIGVTSLCLEEDACKKIEDGKDYTK 174
                   G+Q +     +  EG +  E G     N+ V  + +E+DA K I D      
Sbjct: 99  YFYPDLPQGYQISQLYHPIVGEGEVLVELGDGTARNVRVERIHMEQDAGKSIHDMDPNMS 158

Query: 175 YC-VDRLGIPLLEITTEPDITSPKMGKEAARRIGTILRATGKVKRGL--GTIRQDVNISI 231
           +  ++R G+ L+EI + PDI  P+       ++  I++  G     +  G +R DVN+S+
Sbjct: 159 FVDLNRTGVCLMEIVSRPDIRGPEEAAAYIAKLRQIMQYLGTCDGNMQNGNLRADVNVSV 218

Query: 232 KN----------------GARIEVKGVQNLDLIEKIIENEVTRQISLNE 264
                             G R E+K + ++  I++ I+ E  RQI++ E
Sbjct: 219 CRPGQYEKYQETQDFSHLGTRCEIKNMNSMRFIQQAIDVEARRQIAIIE 267